RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 NR1H2P55055 460 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 KCNJ10P78508 379 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 CDK6Q00534 326 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 SPIBQ01892 262 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 LTB4RQ15722 352 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 GALNT18Q6P9A2 607 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 TMEM184AQ6ZMB5 413 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 CCDC81Q6ZN84 652 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 SETD7Q8WTS6 366 aaKnown RBP11.96□□□□□ -0.5
LIMK1-201ENST00000336180 KAT2AQ92830 837 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 CXorf40BQ96DE9 158 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 GPR174Q9BXC1 333 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 ASPSCR1Q9BZE9 553 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 FANCEQ9HB96 536 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 IL1RAPQ9NPH3 570 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 ACSL5Q9ULC5 683 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 SLC17A4Q9Y2C5 497 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 CEPT1Q9Y6K0 416 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 LOC100130705A0A1B0GUX0 176 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 LINC00854A0A1B0GVQ3 168 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 HTR3EA5X5Y0 456 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 RNASET2O00584 256 aaKnown RBP11.95□□□□□ -0.5
LIMK1-201ENST00000336180 RPN2P04844 631 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 OR12D1P0DN82 309 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 IL1RNP18510 177 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 MAPK9P45984 424 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 LSM11P83369 360 aaKnown RBP eCLIP11.95□□□□□ -0.5
LIMK1-201ENST00000336180 OCA2Q04671 838 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 RPA4Q13156 261 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 AGERQ15109 404 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 SYPL1Q16563 259 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 KLHDC8AQ8IYD2 350 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 PACRGLQ8N7B6 248 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 SMRP1Q8NCR6 262 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 ZNF555Q8NEP9 628 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 OR2L3Q8NG85 312 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 OR5K1Q8NHB7 308 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 C16orf58Q96GQ5 468 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 RBCK1Q9BYM8 510 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 TTYH1Q9H313 450 aaPredicted RBP11.95□□□□□ -0.5
LIMK1-201ENST00000336180 MYNNQ9NPC7 610 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 ATAD3AQ9NVI7 634 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 ZNF282Q9UDV7 671 aaPredicted RBP11.95□□□□□ -0.5
LIMK1-201ENST00000336180 APOBEC3BQ9UH17 382 aaKnown RBP11.95□□□□□ -0.5
LIMK1-201ENST00000336180 ATP6V1HQ9UI12 483 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 ZNF639Q9UID6 485 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 BTNL2Q9UIR0 455 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 MTCH2Q9Y6C9 303 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 CAPN5O15484 640 aaPredicted RBP11.95□□□□□ -0.5
LIMK1-201ENST00000336180 PDPK1O15530 556 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 PRMT3O60678 531 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 BTN3A2P78410 334 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 DBPQ10586 325 aaPredicted RBP11.95□□□□□ -0.5
LIMK1-201ENST00000336180 SPATS1Q496A3 300 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 TJAP1Q5JTD0 557 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 TMEM236Q5W0B7 351 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 CBLL1Q75N03 491 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 PRSS41Q7RTY9 318 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 C8orf59Q8N0T1 100 aaPredicted RBP11.95□□□□□ -0.5
LIMK1-201ENST00000336180 GOLM1Q8NBJ4 401 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 WDR34Q96EX3 536 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 MAGEB10Q96LZ2 347 aaPredicted RBP11.95□□□□□ -0.5
LIMK1-201ENST00000336180 GABRG3Q99928 467 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 BHLHE41Q9C0J9 482 aaPredicted RBP11.95□□□□□ -0.5
LIMK1-201ENST00000336180 FAM192AQ9GZU8 254 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 REEP1Q9H902 201 aa11.95□□□□□ -0.5
LIMK1-201ENST00000336180 MDC1Q14676 2089 aaKnown RBP11.95□□□□□ -0.5
LIMK1-201ENST00000336180 OR6C74A6NCV1 312 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 LRIT2A6NDA9 550 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 FRS3O43559 492 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 POU1F1P28069 291 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 ALDH4A1P30038 563 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 PIK3CBP42338 1070 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 NCBP2P52298 156 aaKnown RBP eCLIP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 NUDT6P53370 316 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 LSM3P62310 102 aaKnown RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 REEP5Q00765 189 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 CAMK2BQ13554 666 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 C6orf183Q5T699 404 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 LAIR2Q6ISS4 152 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 EIF3MQ7L2H7 374 aaKnown RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 NLNQ9BYT8 704 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 CHST8Q9H2A9 424 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 A0A1W2PR48 441 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 OR2W5A6NFC9 320 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 H0YJX3 145 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 BCKDKO14874 412 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 PCDH17O14917 1159 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 CASC3O15234 703 aaKnown RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 IGFBP1P08833 259 aaPredicted RBP11.94□□□□□ -0.5
LIMK1-201ENST00000336180 DDCP20711 480 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 PKLRP30613 574 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 MAP2K4P45985 399 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 ALG11Q2TAA5 492 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 DEFB134Q4QY38 66 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 OR4C11Q6IEV9 310 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 TMEM107Q6UX40 140 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 MTSS1LQ765P7 747 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 C6orf120Q7Z4R8 191 aa11.94□□□□□ -0.5
LIMK1-201ENST00000336180 AMIGO1Q86WK6 493 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms