RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 AGTR2P50052 363 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 TTLL10Q6ZVT0 673 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 TMIGD2Q96BF3 282 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ZNF486Q96H40 463 aaPredicted RBP7.62□□□□□ -1.19
CIITA-201ENST00000324288 CD180Q99467 661 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 SERINC1Q9NRX5 453 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 GKN1Q9NS71 199 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 GFOD1Q9NXC2 390 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 TMEM9Q9P0T7 183 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 CAPN5O15484 640 aaPredicted RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 AIF1P55008 147 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 MAP4K2Q12851 820 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 CHRNA6Q15825 494 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 FTMTQ8N4E7 242 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 TMEM156Q8N614 296 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 C1orf52Q8N6N3 182 aaKnown RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 PHOSPHO1Q8TCT1 267 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SH3RF2Q8TEC5 729 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 FN3KQ9H479 309 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 PCDHB3Q9Y5E6 796 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 WNT9AO14904 365 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SCGB1D1O95968 90 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 MT-ND5P03915 603 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 RAB6AP20340 208 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 BTN1A1Q13410 526 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 GOLGA7Q7Z5G4 137 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 NUDT13Q86X67 352 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 GTPBP8Q8N3Z3 284 aaPredicted RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 ENDOVQ8N8Q3 282 aaKnown RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 ZDHHC1Q8WTX9 485 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 LMF1Q96S06 567 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 KCNK6Q9Y257 313 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 PREX1Q8TCU6 1659 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SPEF2Q9C093 1822 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SH3PXD2BA1X283 911 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 PPP1R11O60927 126 aaPredicted RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 PRPS2P11908 318 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SYN1P17600 705 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 HK3P52790 923 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 PRMT2P55345 433 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 C3orf33Q6P1S2 294 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 NPAS4Q8IUM7 802 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 UBQLNLQ8IYU4 475 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SNX27Q96L92 541 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SCP2D1Q9UJQ7 156 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 H0YGN5 161 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 AIPO00170 330 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SOCS2O14508 198 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 NUDT7P0C024 238 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 RBMXP38159 391 aaKnown RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 ABHD15Q6UXT9 468 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SLC36A4Q6YBV0 504 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 Q6ZVU0 165 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 ZNF619Q8N2I2 560 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 RIT1Q92963 219 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 DPH2Q9BQC3 489 aaPredicted RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 SMIM3Q9BZL3 60 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 NTN4Q9HB63 628 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 ZFR2Q9UPR6 939 aaKnown RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 A6NIN4 97 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SLC1A7O00341 560 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 B4GALT4O60513 344 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 TSPAN15O95858 294 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 MC2RQ01718 297 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 PON3Q15166 354 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 NEIL3Q8TAT5 605 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SCGB3A2Q96PL1 93 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 PCDHGA7Q9Y5G6 932 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 GP1BBP13224 206 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 AOC1P19801 751 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 CHMP24386 653 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 CD34P28906 385 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 ARSFP54793 590 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 NIPAL4Q0D2K0 466 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 GRM2Q14416 872 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 NDUFAF5Q5TEU4 345 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 LMX1AQ8TE12 382 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SECISBP2Q96T21 854 aaKnown RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 A6NL46 340 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 FAM227AF5H4B4 570 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SLC19A2O60779 497 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 RASAL1O95294 804 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 HLA-EP13747 358 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 PTPN2P17706 415 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 OPRL1P41146 370 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 PREPP48147 710 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 PER3P56645 1201 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 GALEQ14376 348 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SIRPB2Q5JXA9 342 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 TREML1Q86YW5 311 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 TRMT10AQ8TBZ6 339 aaKnown RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 RHBDF1Q96CC6 855 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 RNF11Q9Y3C5 154 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 SOX1O00570 391 aaPredicted RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 SGCEO43556 437 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 PIP5K1CO60331 668 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 C4BPAP04003 597 aaKnown RBP7.61□□□□□ -1.19
CIITA-201ENST00000324288 CCINQ13939 588 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 GPRC6AQ5T6X5 926 aa7.61□□□□□ -1.19
CIITA-201ENST00000324288 TXNDC8Q6A555 127 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms