RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 TM7SF3Q9NS93 570 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 OSGIN1Q9UJX0 560 aa21.26■□□□□ 0.99
PNKP-201ENST00000322344 SH3BP5O60239 455 aa21.25■□□□□ 0.99
PNKP-201ENST00000322344 C21orf33P30042 268 aaPredicted RBP21.25■□□□□ 0.99
PNKP-201ENST00000322344 DRD3P35462 400 aa21.25■□□□□ 0.99
PNKP-201ENST00000322344 CLK1P49759 484 aaKnown RBP21.25■□□□□ 0.99
PNKP-201ENST00000322344 CLCNKAP51800 687 aa21.25■□□□□ 0.99
PNKP-201ENST00000322344 DMPKQ09013 629 aa21.25■□□□□ 0.99
PNKP-201ENST00000322344 GANABQ14697 944 aaKnown RBP21.25■□□□□ 0.99
PNKP-201ENST00000322344 NIPAL1Q6NVV3 410 aa21.25■□□□□ 0.99
PNKP-201ENST00000322344 TNFAIP8L2Q6P589 184 aaPredicted RBP21.25■□□□□ 0.99
PNKP-201ENST00000322344 C9orf43Q8TAL5 461 aaPredicted RBP21.25■□□□□ 0.99
PNKP-201ENST00000322344 TMEM19Q96HH6 336 aa21.25■□□□□ 0.99
PNKP-201ENST00000322344 GDE1Q9NZC3 331 aa21.25■□□□□ 0.99
PNKP-201ENST00000322344 M0R082 166 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 AIREO43918 545 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 MFN2O95140 757 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 PCDH8O95206 1070 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 LIPAP38571 399 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 CTSKP43235 329 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 PUM1Q14671 1186 aaKnown RBP eCLIP21.24■□□□□ 0.99
PNKP-201ENST00000322344 PTGES3Q15185 160 aaKnown RBP21.24■□□□□ 0.99
PNKP-201ENST00000322344 ADGRD2Q7Z7M1 963 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 MINDY2Q8NBR6 621 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 PSMA8Q8TAA3 256 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 GTPBP3Q969Y2 492 aaKnown RBP21.24■□□□□ 0.99
PNKP-201ENST00000322344 DDX31Q9H8H2 851 aaKnown RBP21.24■□□□□ 0.99
PNKP-201ENST00000322344 SFXN1Q9H9B4 322 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 NMNAT1Q9HAN9 279 aaPredicted RBP21.24■□□□□ 0.99
PNKP-201ENST00000322344 LHX9Q9NQ69 397 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 SIRT3Q9NTG7 399 aaPredicted RBP21.24■□□□□ 0.99
PNKP-201ENST00000322344 ZSCAN32Q9NX65 697 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 TAS2R7Q9NYW3 318 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 FTSJ1Q9UET6 329 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 TMCC3Q9ULS5 477 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.24■□□□□ 0.99
PNKP-201ENST00000322344 PMF1-BGLAPU3KQ54 211 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 FEZF1A0PJY2 475 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 TMEM247A6NEH6 219 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 ZAR1LA6NP61 321 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 OR1F1O43749 312 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 CLEC3AO75596 197 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 ADAP00813 363 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 PSMB5P28074 263 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 CRISP1P54107 249 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 TAS2R38P59533 333 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 AGBL4Q5VU57 503 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 ZNF770Q6IQ21 691 aaPredicted RBP21.24■□□□□ 0.99
PNKP-201ENST00000322344 MFSD4AQ8N468 514 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 TTLQ8NG68 377 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 ZNF675Q8TD23 568 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 RPL3LQ92901 407 aaKnown RBP21.24■□□□□ 0.99
PNKP-201ENST00000322344 ZNF607Q96SK3 696 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 BTBD2Q9BX70 525 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 SLIRPQ9GZT3 109 aaKnown RBP21.24■□□□□ 0.99
PNKP-201ENST00000322344 MTIF3Q9H2K0 278 aaKnown RBP21.24■□□□□ 0.99
PNKP-201ENST00000322344 WDR26Q9H7D7 661 aa21.24■□□□□ 0.99
PNKP-201ENST00000322344 CNOT2Q9NZN8 540 aaKnown RBP21.24■□□□□ 0.99
PNKP-201ENST00000322344 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.24■□□□□ 0.99
PNKP-201ENST00000322344 EFCAB10A6NFE3 127 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 OXSR1O95747 527 aaPredicted RBP21.23■□□□□ 0.99
PNKP-201ENST00000322344 DRD2P14416 443 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 CSNK1G2P78368 415 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 OLR1P78380 273 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 HSPB3Q12988 150 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 RUNX3Q13761 415 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 SYT16Q17RD7 645 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 RPS26P11Q5JNZ5 115 aaPredicted RBP21.23■□□□□ 0.99
PNKP-201ENST00000322344 KIAA1161Q6NSJ0 714 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 KLHL17Q6TDP4 642 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 SLC46A3Q7Z3Q1 461 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 EXOSC8Q96B26 276 aaKnown RBP21.23■□□□□ 0.99
PNKP-201ENST00000322344 FERD3LQ96RJ6 166 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 MROQ9BYG7 248 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 ABCG4Q9H172 646 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 DCSTAMPQ9H295 470 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 AMBNQ9NP70 447 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 GPR83Q9NYM4 423 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 SELENONQ9NZV5 590 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 HCN2Q9UL51 889 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 PDE4DIPQ5VU43 2346 aa21.23■□□□□ 0.99
PNKP-201ENST00000322344 FUOMA2VDF0 154 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 TMPRSS11DO60235 418 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 KAT7O95251 611 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 GASTP01350 101 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 RPS26P62854 115 aaKnown RBP21.22■□□□□ 0.99
PNKP-201ENST00000322344 GPM6BQ13491 265 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 IRF3Q14653 427 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 INAQ16352 499 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 TMEM236Q5W0B7 351 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 EGFLAMQ63HQ2 1017 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 FRMPD2BQ6IN97 320 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 FAM180BQ6P0A1 224 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 SLC44A2Q8IWA5 706 aaPredicted RBP21.22■□□□□ 0.99
PNKP-201ENST00000322344 RAB11FIP5Q9BXF6 653 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 ALOXE3Q9BYJ1 711 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 MGAT4BQ9UQ53 548 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 MID1O15344 667 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 STSP08842 583 aa21.22■□□□□ 0.99
PNKP-201ENST00000322344 POU2F1P14859 743 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms