RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 SPACA6W5XKT8 324 aa12.2□□□□□ -0.46
DNMT3A-202ENST00000321117 HLA-EP13747 358 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 ETV3P41162 512 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 TBPL1P62380 186 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 TMEM115Q12893 351 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 NFE2L1Q14494 772 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 LRIT3Q3SXY7 679 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 C11orf88Q6PI97 169 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 L3MBTL4Q8NA19 623 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 JPH3Q8WXH2 748 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 KAT2AQ92830 837 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 PPP1R16AQ96I34 528 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 NLKQ9UBE8 527 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 A0A1W2PRU2 124 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 A6NL46 340 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 FAM170BA6NMN3 283 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 GPR37L1O60883 481 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 PCMT1P22061 227 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 ATP12AP54707 1039 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 TIAL1Q01085 375 aaKnown RBP eCLIP12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 SNAP47Q5SQN1 464 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 SLC36A4Q6YBV0 504 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 GDPD3Q7L5L3 318 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 ELMOD2Q8IZ81 293 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 ZFP3Q96NJ6 502 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 SLA2Q9H6Q3 261 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 BRF2Q9HAW0 419 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 SLC6A13Q9NSD5 602 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 MED16Q9Y2X0 877 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 J3KTA2 159 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 FHP07954 510 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 KELP23276 732 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 CCND3P30281 292 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 DSC1Q08554 894 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 CCDC28AQ8IWP9 274 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 OR9A1PQ8NGU1 263 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 NEIL3Q8TAT5 605 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 AUTS2Q8WXX7 1259 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 TRIB2Q92519 343 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 NIPSNAP1Q9BPW8 284 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 ZNF224Q9NZL3 707 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 PADI2Q9Y2J8 665 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 ZNF780BQ9Y6R6 833 aa12.19□□□□□ -0.46
DNMT3A-202ENST00000321117 WISP3O95389 354 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 RB1P06400 928 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 CPN2P22792 545 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 HBA1P69905 142 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 IKBIPQ70UQ0 350 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 LHFPL3Q86UP9 236 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 NLGN4XQ8N0W4 816 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 IQCF1Q8N6M8 205 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 C10orf53Q8N6V4 93 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 ZFP41Q8N8Y5 198 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 OR10H4Q8NGA5 316 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 CIDECQ96AQ7 238 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 TBX5Q99593 518 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 NDUFAF4Q9P032 175 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 RPS6KB2Q9UBS0 482 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 SLCO3A1Q9UIG8 710 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 NCKAP1Q9Y2A7 1128 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 EXOSC1Q9Y3B2 195 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 BOLA1Q9Y3E2 137 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 GSAPA4D1B5 854 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 MMP20O60882 483 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 ATF6P18850 670 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 CHMP24386 653 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 ACSL1P33121 698 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 NCBP2P52298 156 aaKnown RBP eCLIP12.18□□□□□ -0.462e-6■□□□□ 9.7
DNMT3A-202ENST00000321117 PRR5P85299 388 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 MC1RQ01726 317 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 ZNF311Q5JNZ3 666 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 ALG1LQ6GMV1 187 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 SMARCD3Q6STE5 483 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 C16orf78Q8WTQ4 265 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 GATAD2BQ8WXI9 593 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 TMEM19Q96HH6 336 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 METTL2AQ96IZ6 378 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 FERD3LQ96RJ6 166 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 TNFRSF10DQ9UBN6 386 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 TSPAN9O75954 239 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 AVPR1BP47901 424 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 FAM180BQ6P0A1 224 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 SLC27A4Q6P1M0 643 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 NUDT18Q6ZVK8 323 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 OR5P2Q8WZ92 322 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 DPF3Q92784 378 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 PKMYT1Q99640 499 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 TTLL2Q9BWV7 592 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 BTBD1Q9H0C5 482 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 UCKL1Q9NWZ5 548 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 PCDHGB2Q9Y5G2 931 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 N6AMT1Q9Y5N5 214 aa12.18□□□□□ -0.46
DNMT3A-202ENST00000321117 SLC9A3R1O14745 358 aaPredicted RBP12.17□□□□□ -0.46
DNMT3A-202ENST00000321117 OR5F1O95221 314 aa12.17□□□□□ -0.46
DNMT3A-202ENST00000321117 SSTR4P31391 388 aa12.17□□□□□ -0.46
DNMT3A-202ENST00000321117 AMIGO1Q86WK6 493 aa12.17□□□□□ -0.46
DNMT3A-202ENST00000321117 CALHM3Q86XJ0 350 aa12.17□□□□□ -0.46
DNMT3A-202ENST00000321117 IFNL1Q8IU54 200 aa12.17□□□□□ -0.46
DNMT3A-202ENST00000321117 GLYATL1Q969I3 302 aa12.17□□□□□ -0.46
DNMT3A-202ENST00000321117 ZNF514Q96K75 400 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms