RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 TUBGCP3Q96CW5 907 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 PDLIM5Q96HC4 596 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 BTN2A3PQ96KV6 586 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 C3orf30Q96M34 536 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 NSMCE2Q96MF7 247 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 COG8Q96MW5 612 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF382Q96SR6 550 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 MYOCQ99972 504 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 FEM1AQ9BSK4 669 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 UGT2B28Q9BY64 529 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 TGIF2Q9GZN2 237 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 POLR1EQ9GZS1 481 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 SIK2Q9H0K1 926 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 CDIP1Q9H305 208 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 GORASP2Q9H8Y8 452 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 MID1IP1Q9NPA3 183 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 NT5MQ9NPB1 228 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 FZD3Q9NPG1 666 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 OLA1Q9NTK5 396 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 CATSPERZQ9NTU4 200 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 NLE1Q9NVX2 485 aaPredicted RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 ASIC5Q9NY37 505 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 TAS2R13Q9NYV9 303 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 POLG2Q9UHN1 485 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 BLOC1S6Q9UL45 172 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 PSME2Q9UL46 239 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 PNMA8BQ9ULN7 279 aaPredicted RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 SCML1Q9UN30 329 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 NCKAP1Q9Y2A7 1128 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 NAALAD2Q9Y3Q0 740 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 TNPO3Q9Y5L0 923 aaKnown RBP4.69□□□□□ -1.66
CKS1B-201ENST00000308987 OR51B4Q9Y5P0 310 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 HS3ST4Q9Y661 456 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 CREBBPQ92793 2442 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 AKAP9Q99996 3911 aa4.69□□□□□ -1.66
CKS1B-201ENST00000308987 MED13Q9UHV7 2174 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TBC1D3DA0A087WVF3 549 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TBC1D3IA0A087WXS9 549 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TBC1D3EA0A087X179 549 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TBC1D3KA0A087X1G2 549 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 A0A1W2PQU0 124 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 BLACEA4D250 179 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TBC1D3FA6NER0 549 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PRAMEF25A6NGN4 478 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 CCDC154A6NI56 674 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TBC1D3LB9A6J9 549 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 FAM47E-STBD1D6RA91 191 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 EI24O14681 340 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 INPP4BO15327 924 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 SLC31A1O15431 190 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 YKT6O15498 198 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 FFAR2O15552 330 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 SMAD6O43541 496 aaKnown RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 SNX2O60749 519 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PRAMEF11O60813 436 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 CSO75390 466 aaKnown RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 GMNNO75496 209 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 CRCPO75575 148 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PIAS2O75928 621 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 SCELO95171 688 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 FKBP9O95302 570 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 NDST3O95803 873 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 MOCS2O96007 188 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 MT-CO1P00395 513 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 GOT2P00505 430 aaKnown RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ALPLP05186 524 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 HNRNPCP07910 306 aaKnown RBP eCLIP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ANXA6P08133 673 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 F7P08709 466 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 GNAO1P09471 354 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 CCDC159P0C7I6 412 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TBC1D3HP0C7X1 549 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 THRBP10828 461 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 CKMT1AP12532 417 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ITIH1P19827 911 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 C5AR1P21730 350 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 JAK1P23458 1154 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 DNAJA1P31689 397 aaKnown RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 RYKP34925 604 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ETFBP38117 255 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 RPS19P39019 145 aaKnown RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 CD86P42081 329 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ZFP36L2P47974 494 aaKnown RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 LSSP48449 732 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 SLC11A2P49281 568 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ARRB1P49407 418 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ENTPD1P49961 510 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 SCNN1BP51168 640 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 POLR2JP52435 117 aaKnown RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PDX1P52945 283 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PLK1P53350 603 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PGGT1BP53609 377 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ARSFP54793 590 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 CDH15P55291 814 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 CLDN2P57739 230 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 GABREP78334 506 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TIAL1Q01085 375 aaKnown RBP eCLIP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 CHRNB3Q05901 458 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 SRSF1Q07955 248 aaKnown RBP eCLIP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 DUSP8Q13202 625 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms