RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 ZNF347Q96SE7 839 aa12.89□□□□□ -0.35
TTC39B-201ENST00000297615 KCNS3Q9BQ31 491 aa12.89□□□□□ -0.35
TTC39B-201ENST00000297615 DOHHQ9BU89 302 aa12.89□□□□□ -0.35
TTC39B-201ENST00000297615 EHD1Q9H4M9 534 aa12.89□□□□□ -0.35
TTC39B-201ENST00000297615 SYNPO2LQ9H987 977 aa12.89□□□□□ -0.35
TTC39B-201ENST00000297615 MARCH7Q9H992 704 aa12.89□□□□□ -0.35
TTC39B-201ENST00000297615 GMEB1Q9Y692 573 aa12.89□□□□□ -0.35
TTC39B-201ENST00000297615 C5orf58C9J3I9 102 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 PGRMC2O15173 223 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 DLGAP3O95886 979 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 OR12D1P0DN82 309 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 CKMT1AP12532 417 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 TNNI3P19429 210 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 C1orf61Q13536 156 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 IRF4Q15306 451 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 CST6Q15828 149 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 ADGRF3Q8IZF5 1079 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 IQCF1Q8N6M8 205 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 PHF10Q8WUB8 498 aaKnown RBP12.88□□□□□ -0.35
TTC39B-201ENST00000297615 CHTF18Q8WVB6 975 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 APH1BQ8WW43 257 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 RAD51AP1Q96B01 352 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 TIFAQ96CG3 184 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 VPS35Q96QK1 796 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 RBCK1Q9BYM8 510 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 REEP4Q9H6H4 257 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 C6orf106Q9H6K1 298 aaPredicted RBP12.88□□□□□ -0.35
TTC39B-201ENST00000297615 ZNF556Q9HAH1 456 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 TMEM45AQ9NWC5 275 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 MS4A12Q9NXJ0 267 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 ASIC5Q9NY37 505 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 M0R3H8 397 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 RGS5O15539 181 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 ERI3O43414 337 aaKnown RBP12.88□□□□□ -0.35
TTC39B-201ENST00000297615 ZNF12P17014 697 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 ALOX12P18054 663 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 GABARAPL2P60520 117 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 CDK6Q00534 326 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 ST3GAL4Q11206 333 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 PIN1Q13526 163 aaPredicted RBP12.88□□□□□ -0.35
TTC39B-201ENST00000297615 HORMAD2Q8N7B1 307 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 KCT2Q8NC54 265 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 ZG16BQ96DA0 208 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 DNAJA3Q96EY1 480 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 C7orf34Q96L11 122 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 ALPK1Q96QP1 1244 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 WDR26Q9H7D7 661 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 TAAR2Q9P1P5 351 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 NDRG4Q9ULP0 352 aaKnown RBP12.88□□□□□ -0.35
TTC39B-201ENST00000297615 PCDHGB3Q9Y5G1 929 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 LYVE1Q9Y5Y7 322 aa12.88□□□□□ -0.35
TTC39B-201ENST00000297615 LRRTM2O43300 516 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 LILRB5O75023 590 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 PVRP15151 417 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 ITGB7P26010 798 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 GRK5P34947 590 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 MAGEA2P43356 314 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 PPP2CBP62714 309 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 PPP2CAP67775 309 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 MTAPQ13126 283 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 LASP1Q14847 261 aaKnown RBP12.87□□□□□ -0.35
TTC39B-201ENST00000297615 GPR19Q15760 415 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 GGTA1PQ4G0N0 100 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 GCNT6Q5T4J0 391 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 C18orf63Q68DL7 685 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 ENPP7Q6UWV6 458 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.87□□□□□ -0.35
TTC39B-201ENST00000297615 SYNPOQ8N3V7 929 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 AQP11Q8NBQ7 271 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 OR8J2Q8NGG1 315 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 C16orf58Q96GQ5 468 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 COL21A1Q96P44 957 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 FAM83CQ9BQN1 747 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 DUSP21Q9H596 190 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 TRBC2A0A5B9 178 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 PTHP01270 115 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 SERPINB10P48595 397 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 NKX2-5P52952 324 aaPredicted RBP12.87□□□□□ -0.35
TTC39B-201ENST00000297615 ITGA1P56199 1179 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 CSTF3Q12996 717 aaKnown RBP12.87□□□□□ -0.35
TTC39B-201ENST00000297615 ERICH5Q6P6B1 374 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 LRRTM4Q86VH4 590 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 TSPYL5Q86VY4 417 aaPredicted RBP12.87□□□□□ -0.35
TTC39B-201ENST00000297615 FBXL6Q8N531 539 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 RLN3Q8WXF3 142 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 LZICQ8WZA0 190 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 SLC28A3Q9HAS3 691 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 NTNG1Q9Y2I2 539 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 MAP1BP46821 2468 aaKnown RBP12.87□□□□□ -0.35
TTC39B-201ENST00000297615 NDUFS4O43181 175 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 SLC28A2O43868 658 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 ADAM23O75077 832 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 JRKO75564 520 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 SULT1C4O75897 302 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 ITGAMP11215 1152 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 HOXB9P17482 250 aaPredicted RBP12.87□□□□□ -0.35
TTC39B-201ENST00000297615 DDX5P17844 614 aaKnown RBP12.87□□□□□ -0.35
TTC39B-201ENST00000297615 EPHA5P54756 1037 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 SELENOWP63302 87 aa12.87□□□□□ -0.35
TTC39B-201ENST00000297615 ELP6Q0PNE2 266 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms