RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CTC1Q2NKJ3 1217 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 ISCA2Q86U28 154 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 TMEFF1Q8IYR6 380 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 GATSQ8NAP1 163 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR56A3Q8NH54 315 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 TAS2R7Q9NYW3 318 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 OAZ3Q9UMX2 235 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 HCN4Q9Y3Q4 1203 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 RNF13O43567 381 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 EDIL3O43854 480 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 SATL1Q86VE3 508 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 HORMAD2Q8N7B1 307 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 MDGA1Q8NFP4 955 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR2L5Q8NG80 312 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR52B6Q8NGF0 335 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 EDAQ92838 391 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 WDR12Q9GZL7 423 aaKnown RBP16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 AIG1Q9NVV5 245 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR6C2Q9NZP2 312 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 MGAT4BQ9UQ53 548 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 ITGA10O75578 1167 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 TSPAN9O75954 239 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 NNATQ16517 81 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 TPRG1LQ5T0D9 272 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 HSDL2Q6YN16 418 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 C6orf120Q7Z4R8 191 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 ZNF440Q8IYI8 595 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 DIRAS2Q96HU8 199 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 ZNF317Q96PQ6 595 aaPredicted RBP16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 TM9SF3Q9HD45 589 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 ING4Q9UNL4 249 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 UGDHO60701 494 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 DBIP07108 87 aaKnown RBP16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 CTBP2P56545 445 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 MERTKQ12866 999 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 DEFB123Q8N688 67 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR2L2Q8NH16 312 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 CRB3Q9BUF7 120 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 MEAF6Q9HAF1 191 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 FAM227AF5H4B4 570 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 ARHGEF15O94989 841 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 RLN1P04808 185 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 CLDN8P56748 225 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 PPP1R3AQ16821 1122 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 C5orf22Q49AR2 442 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 LCTLQ6UWM7 567 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 TMEM107Q6UX40 140 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 ZNF765Q7L2R6 523 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 GPAT4Q86UL3 456 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 CD200R1Q8TD46 325 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 OSTF1Q92882 214 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 LOC285095A0A1B0GVY8 99 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 NPIPA2E9PIF3 369 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 NPIPA3F8WFD2 350 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 CACNG3O60359 315 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 CKMT2P17540 419 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 SMCO1Q147U7 214 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 TRIM73Q86UV7 250 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 LRRC17Q8N6Y2 441 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 SERINC2Q96SA4 455 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 ABLIM1O14639 778 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 PPM1BO75688 479 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 CLUP10909 449 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 METTL2BQ6P1Q9 378 aaKnown RBP16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 TMEM173Q86WV6 379 aaPredicted RBP16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 KRTCAP2Q8N6L1 136 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 ARFGAP1Q8N6T3 406 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 PHF7Q9BWX1 381 aaPredicted RBP16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 ARNT2Q9HBZ2 717 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 MTMR10Q9NXD2 777 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 PCTPQ9UKL6 214 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 NFS1Q9Y697 457 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 NRAPQ86VF7 1730 aa16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 MYH14Q7Z406 1995 aaKnown RBP16.94■□□□□ 0.3
CDC42EP3-201ENST00000295324 IRS1P35568 1242 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 FOLR3P41439 243 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 AP3S2P59780 193 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 CTBSQ01459 385 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 RHDQ02161 417 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 LIN52Q52LA3 116 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 FAM69BQ5VUD6 431 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 ALG1LQ6GMV1 187 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 NANOGP8Q6NSW7 305 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 FBXO42Q6P3S6 717 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 PRR11Q96HE9 360 aaPredicted RBP16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 RTP3Q9BQQ7 232 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR51I1Q9H343 314 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 NANOGQ9H9S0 305 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 ZBTB20Q9HC78 741 aaPredicted RBP16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 TRPV5Q9NQA5 729 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 PCDHB14Q9Y5E9 798 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 IL12AP29459 219 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 GRB7Q14451 532 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 BICRALQ6AI39 1079 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 NADSYN1Q6IA69 706 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR4C15Q8NGM1 316 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 CWH43Q9H720 699 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 KAT8Q9H7Z6 458 aaKnown RBP16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 PSMD9O00233 223 aa16.93■□□□□ 0.3
CDC42EP3-201ENST00000295324 HK1P19367 917 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms