RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ZBTB42B2RXF5 422 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 NPIPA2E9PIF3 369 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 NPIPA3F8WFD2 350 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 EIF1AYO14602 144 aaKnown RBP17.75■□□□□ 0.43
PCDH1-201ENST00000287008 PGCP20142 388 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 RPS3P23396 243 aaKnown RBP eCLIP17.75■□□□□ 0.43
PCDH1-201ENST00000287008 OR1E2P47887 323 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 MRPS21P82921 87 aaKnown RBP17.75■□□□□ 0.43
PCDH1-201ENST00000287008 LRRC26Q2I0M4 334 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 RBM48Q5RL73 367 aaKnown RBP17.75■□□□□ 0.43
PCDH1-201ENST00000287008 OR4N5Q8IXE1 308 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 FBXL8Q96CD0 374 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 CPNE2Q96FN4 548 aaPredicted RBP17.75■□□□□ 0.43
PCDH1-201ENST00000287008 AIG1Q9NVV5 245 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 STOX2Q9P2F5 926 aaPredicted RBP17.75■□□□□ 0.43
PCDH1-201ENST00000287008 KNTC1P50748 2209 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 FAM172BPA6NC97 362 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 J3QLW9 94 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 PPM1BO75688 479 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 ZNF19P17023 458 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 ACSL1P33121 698 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 RORAP35398 523 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 CTBP2P56545 445 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 CLDN2P57739 230 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 OGFOD2Q6N063 350 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 DPPA4Q7L190 304 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 NPLQ9BXD5 320 aaPredicted RBP17.75■□□□□ 0.43
PCDH1-201ENST00000287008 A0A0X1KG70 313 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 POLR1CO15160 346 aaPredicted RBP17.74■□□□□ 0.43
PCDH1-201ENST00000287008 GPR37L1O60883 481 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 PRSS56P0CW18 603 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 GADD45AP24522 165 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 ROR2Q01974 943 aaKnown RBP17.74■□□□□ 0.43
PCDH1-201ENST00000287008 MVKQ03426 396 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 PARS2Q7L3T8 475 aaKnown RBP17.74■□□□□ 0.43
PCDH1-201ENST00000287008 MARCH9Q86YJ5 346 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 DCP2Q8IU60 420 aaKnown RBP17.74■□□□□ 0.43
PCDH1-201ENST00000287008 HTRA1Q92743 480 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 OR1F2PQ96R84 312 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 YTHDF1Q9BYJ9 559 aaKnown RBP17.74■□□□□ 0.43
PCDH1-201ENST00000287008 KIR2DS5A0A0G2JLQ3 304 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 A0A0G2JNG1 304 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 A0A1B0GVI7 797 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 CIB4A0PJX0 185 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 FABP12A6NFH5 140 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 KIR2DS3K7RE56 304 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 CLDN8P56748 225 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 ERVFC1P60507 584 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 KIR2DS5Q14953 304 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 OR4D1Q15615 310 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 SHQ1Q6PI26 577 aaKnown RBP17.74■□□□□ 0.43
PCDH1-201ENST00000287008 LINGO2Q7L985 606 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 TMPRSS9Q7Z410 1059 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 RAB43Q86YS6 212 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 FUBP1Q96AE4 644 aaKnown RBP17.74■□□□□ 0.43
PCDH1-201ENST00000287008 PAK6Q9NQU5 681 aaPredicted RBP17.74■□□□□ 0.43
PCDH1-201ENST00000287008 DNMT3BQ9UBC3 853 aaKnown RBP17.74■□□□□ 0.43
PCDH1-201ENST00000287008 RGPD2P0DJD1 1756 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 OR52A4PA6NMU1 304 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 E7EQ34 232 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 ATF6P18850 670 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 KDELR2P33947 212 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 GBX1Q14549 363 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 TMEM107Q6UX40 140 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 SPATC1Q76KD6 591 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 CCDC80Q76M96 950 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 GALNT10Q86SR1 603 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 CDH24Q86UP0 819 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 RBM12BQ8IXT5 1001 aaKnown RBP17.74■□□□□ 0.43
PCDH1-201ENST00000287008 GPR26Q8NDV2 337 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 TMIEQ8NEW7 156 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 OR5AR1Q8NGP9 310 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 OMA1Q96E52 524 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 BRWD1Q9NSI6 2320 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 ZCWPW2A0A1B0GU75 182 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 C11orf98E9PRG8 122 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 P04436 131 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 ITGA5P08648 1049 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 GSTT2BP0CG30 244 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 SOX9P48436 509 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 SLC9A3P48764 834 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 ISCA2Q86U28 154 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 TCEANCQ8N8B7 351 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 OR4C15Q8NGM1 316 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 DIO2Q92813 273 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 DTD2Q96FN9 168 aa17.74■□□□□ 0.43
PCDH1-201ENST00000287008 PLD2O14939 933 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 HLA-DPB1P04440 258 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 TNFAIP8L3Q5GJ75 292 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 RAET1LQ5VY80 246 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 CES4AQ5XG92 561 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 NAT6Q93015 286 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 ORAI3Q9BRQ5 295 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 NFS1Q9Y697 457 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 LOC100130705A0A1B0GUX0 176 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 CLDN25C9JDP6 229 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 CBFA2T3O75081 653 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 SCRN3Q0VDG4 424 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 DEFB133Q30KQ1 61 aa17.73■□□□□ 0.43
PCDH1-201ENST00000287008 KDELC1Q6UW63 502 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 401 ms