RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 ZNF761Q86XN6 746 aaPredicted RBP10.8□□□□□ -0.68
USP6NL-201ENST00000277575 CLECL1Q8IZS7 167 aa10.8□□□□□ -0.68
USP6NL-201ENST00000277575 OR13J1Q8NGT2 312 aa10.8□□□□□ -0.68
USP6NL-201ENST00000277575 TNFAIP8L1Q8WVP5 186 aa10.8□□□□□ -0.68
USP6NL-201ENST00000277575 TMEM125Q96AQ2 219 aa10.8□□□□□ -0.68
USP6NL-201ENST00000277575 NELL2Q99435 816 aa10.8□□□□□ -0.68
USP6NL-201ENST00000277575 OR51I1Q9H343 314 aa10.8□□□□□ -0.68
USP6NL-201ENST00000277575 ANKMY1Q9P2S6 941 aa10.8□□□□□ -0.68
USP6NL-201ENST00000277575 CACNA1SQ13698 1873 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 PSMD9O00233 223 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 RBMXL2O75526 392 aaKnown RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 ITGA10O75578 1167 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 INMTO95050 263 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 PORP16435 677 aaPredicted RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 ATP6AP1Q15904 470 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 COQ5Q5HYK3 327 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 CES4AQ5XG92 561 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 HMGN2P46Q86SG4 172 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 PLXDC1Q8IUK5 500 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 MYLIPQ8WY64 445 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 KIAA1143Q96AT1 154 aaPredicted RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 DTD2Q96FN9 168 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 APIPQ96GX9 242 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 RBP7Q96R05 134 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 SLC22A12Q96S37 553 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 PELOQ9BRX2 385 aaKnown RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 G6PC3Q9BUM1 346 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 STRADBQ9C0K7 418 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 TRIM36Q9NQ86 728 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 PTBP2Q9UKA9 531 aaKnown RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 J3QLW9 94 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 NOS1APO75052 506 aaPredicted RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 CCNKO75909 580 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 PENKP01210 267 aaPredicted RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 TIMP2P16035 220 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 ZNF19P17023 458 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 PXNP49023 591 aaPredicted RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 GRM7Q14831 915 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 CARTPTQ16568 116 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 GRHL2Q6ISB3 625 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 HACD2Q6Y1H2 254 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 UBE2J2Q8N2K1 259 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 RPLP0P6Q8NHW5 317 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 PIK3R3Q92569 461 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 MUS81Q96NY9 551 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 APOOQ9BUR5 198 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 SPATA9Q9BWV2 254 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 EHD1Q9H4M9 534 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 MARCH5Q9NX47 278 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 DNMT3BQ9UBC3 853 aaKnown RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 NWD2Q9ULI1 1742 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 VILLO15195 856 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 SNAP29O95721 258 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 HLA-DPB1P04440 258 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 ETFAP13804 333 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 EDNRAP25101 427 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 HOXD9P28356 352 aaPredicted RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 SLC9A3P48764 834 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 ZNF41P51814 821 aaPredicted RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 CTSCP53634 463 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 ADAM8P78325 824 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 CNPY1Q3B7I2 92 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 NADSYN1Q6IA69 706 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 AKAP14Q86UN6 197 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 ENDOVQ8N8Q3 282 aaKnown RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 ACVR1CQ8NER5 493 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 HPS1Q92902 700 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 ITPAQ9BY32 194 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 SDR39U1Q9NRG7 319 aaPredicted RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 PCDHB14Q9Y5E9 798 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 MYH4Q9Y623 1939 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 SCAMP2O15127 329 aaKnown RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 ARL6IP5O75915 188 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 ZNF20P17024 532 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 SLC3A1Q07837 685 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 CAMK1Q14012 370 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 TAZQ16635 292 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 TSTQ16762 297 aaKnown RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 GALNTL5Q7Z4T8 443 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 TMEM173Q86WV6 379 aaPredicted RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 YIPF7Q8N8F6 280 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 OR51A7Q8NH64 312 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 C1orf216Q8TAB5 229 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 THAP3Q8WTV1 239 aaPredicted RBP10.79□□□□□ -0.68
USP6NL-201ENST00000277575 THEM6Q8WUY1 208 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 TMEM234Q8WY98 164 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 OMA1Q96E52 524 aa10.79□□□□□ -0.68
USP6NL-201ENST00000277575 A0A1W2PRQ8 180 aa10.78□□□□□ -0.68
USP6NL-201ENST00000277575 H3BSA7 217 aa10.78□□□□□ -0.68
USP6NL-201ENST00000277575 EN2P19622 333 aaPredicted RBP10.78□□□□□ -0.68
USP6NL-201ENST00000277575 FBLP22087 321 aaKnown RBP10.78□□□□□ -0.68
USP6NL-201ENST00000277575 CBLP22681 906 aa10.78□□□□□ -0.68
USP6NL-201ENST00000277575 HOXC13P31276 330 aa10.78□□□□□ -0.68
USP6NL-201ENST00000277575 SLC6A11P48066 632 aa10.78□□□□□ -0.68
USP6NL-201ENST00000277575 CSNK1DP48730 415 aa10.78□□□□□ -0.68
USP6NL-201ENST00000277575 FAM189BP81408 668 aa10.78□□□□□ -0.68
USP6NL-201ENST00000277575 SMCO1Q147U7 214 aa10.78□□□□□ -0.68
USP6NL-201ENST00000277575 DUS1LQ6P1R4 473 aaKnown RBP10.78□□□□□ -0.68
USP6NL-201ENST00000277575 RNF111Q6ZNA4 994 aa10.78□□□□□ -0.68
USP6NL-201ENST00000277575 LINC01465Q8N7H1 131 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms