RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 CXCR2P25025 360 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 TEAD1P28347 426 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 PRIM2P49643 509 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 MLLT10P55197 1068 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 INAQ16352 499 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 RPS26P11Q5JNZ5 115 aaPredicted RBP12.91□□□□□ -0.34
VMP1-201ENST00000262291 Q6ZSR6 202 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 IGFN1Q86VF2 1251 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 SHISA5Q8N114 240 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 OR2L3Q8NG85 312 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 OR2L8Q8NGY9 312 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 SGCDQ92629 289 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 RAB8BQ92930 207 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 WDR92Q96MX6 357 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 MBOAT4Q96T53 435 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 AMBRA1Q9C0C7 1298 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 POLR1BQ9H9Y6 1135 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 TAS2R9Q9NYW1 312 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 AHSPQ9NZD4 102 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 SAMD4AQ9UPU9 718 aaKnown RBP12.91□□□□□ -0.34
VMP1-201ENST00000262291 ERGIC3Q9Y282 383 aa12.91□□□□□ -0.34
VMP1-201ENST00000262291 PRR19A6NJB7 356 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 CAPN5O15484 640 aaPredicted RBP12.9□□□□□ -0.34
VMP1-201ENST00000262291 ERI3O43414 337 aaKnown RBP12.9□□□□□ -0.34
VMP1-201ENST00000262291 SH3BP5O60239 455 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 BMP10O95393 424 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 IL7RP16871 459 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 HSD17B2P37059 387 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 MANFP55145 182 aaKnown RBP12.9□□□□□ -0.34
VMP1-201ENST00000262291 ADARB1P78563 741 aaKnown RBP12.9□□□□□ -0.34
VMP1-201ENST00000262291 RAB39AQ14964 217 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 ALG11Q2TAA5 492 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 PRRT3Q5FWE3 981 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 LSRQ86X29 649 aaPredicted RBP12.9□□□□□ -0.34
VMP1-201ENST00000262291 ADHFE1Q8IWW8 467 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 OR13H1Q8NG92 308 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 SPPL2AQ8TCT8 520 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 CREB3L4Q8TEY5 395 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 PCBD2Q9H0N5 130 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 FBXW2Q9UKT8 454 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 NINQ8N4C6 2090 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 FAM47E-STBD1D6RA91 191 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 C8orf89P0DMQ9 161 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 HNRNPA2B1P22626 353 aaKnown RBP12.9□□□□□ -0.34
VMP1-201ENST00000262291 SLC19A1P41440 591 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 MRPS21P82921 87 aaKnown RBP12.9□□□□□ -0.34
VMP1-201ENST00000262291 C1orf61Q13536 156 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 EID3Q8N140 333 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 RGMAQ96B86 450 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 NPLQ9BXD5 320 aaPredicted RBP12.9□□□□□ -0.34
VMP1-201ENST00000262291 TPSD1Q9BZJ3 242 aa12.9□□□□□ -0.34
VMP1-201ENST00000262291 LRIT2A6NDA9 550 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 TMEM229AB2RXF0 380 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 SEMA4FO95754 770 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 FABP3P05413 133 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 DDCP20711 480 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 TUBA4AP68366 448 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 KCNAB2Q13303 367 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 CCINQ13939 588 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 SCARB2Q14108 478 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 TOR1AIP1Q5JTV8 583 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 GCNT6Q5T4J0 391 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 CBLL1Q75N03 491 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 AMIGO1Q86WK6 493 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 C11orf65Q8NCR3 313 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 OR52J3Q8NH60 311 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 CXorf40BQ96DE9 158 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 OSBPL10Q9BXB5 764 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 ANKRA2Q9H9E1 313 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 IL1RAPQ9NPH3 570 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 CA14Q9ULX7 337 aa12.9□□□□□ -0.35
VMP1-201ENST00000262291 A0A087WXM4 84 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 M0QX08 132 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 PGRMC2O15173 223 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 B4GALT2O60909 372 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 ERAL1O75616 437 aaKnown RBP12.89□□□□□ -0.35
VMP1-201ENST00000262291 CHRM5P08912 532 aaPredicted RBP12.89□□□□□ -0.35
VMP1-201ENST00000262291 ATXN8OSP0DMR3 200 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 TPD52P55327 224 aaPredicted RBP12.89□□□□□ -0.35
VMP1-201ENST00000262291 RAB15P59190 212 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 ARPC4P59998 168 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 SRP54P61011 504 aaKnown RBP12.89□□□□□ -0.35
VMP1-201ENST00000262291 PPP2R2BQ00005 443 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 KCNC4Q03721 635 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 DNASE1L3Q13609 305 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 SPDYE7PQ495Y7 208 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 EOGTQ5NDL2 527 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 OR4C11Q6IEV9 310 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 OR2T5Q6IEZ7 315 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 ERICH5Q6P6B1 374 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 USP30Q70CQ3 517 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 EIF3MQ7L2H7 374 aaKnown RBP12.89□□□□□ -0.35
VMP1-201ENST00000262291 NUDT13Q86X67 352 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 TMCO5AQ8N6Q1 288 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 KCT2Q8NC54 265 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 OR2T29Q8NH02 315 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 OR5K1Q8NHB7 308 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 GAS2L1Q99501 681 aaPredicted RBP12.89□□□□□ -0.35
VMP1-201ENST00000262291 YIPF4Q9BSR8 244 aa12.89□□□□□ -0.35
VMP1-201ENST00000262291 MAGIXQ9H6Y5 334 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms