RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 A0A1W2PS29 197 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 GSAPA4D1B5 854 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 ZNF860A6NHJ4 632 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 A8MV72 311 aaPredicted RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 FAM220BPB1ANY3 271 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 TBX1O43435 398 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 DLGAP3O95886 979 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 IDH2P48735 452 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 CCR8P51685 355 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 MPEG1Q2M385 716 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 LRIF1Q5T3J3 769 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 VN1R5Q7Z5H4 357 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 GOLM1Q8NBJ4 401 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 OR52E1Q8NGJ3 308 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 UTP15Q8TED0 518 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 C17orf50Q8WW18 174 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 KCNC2Q96PR1 638 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 DPEP2Q9H4A9 486 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 REEP1Q9H902 201 aa13.95□□□□□ -0.18
TRAFD1-201ENST00000257604 SNRNP200O75643 2136 aaKnown RBP13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 LOC100130705A0A1B0GUX0 176 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 FAM227AF5H4B4 570 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 UGDHO60701 494 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 BCHEP06276 602 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 IGFALSP35858 605 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 TRPC1P48995 793 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 RAB15P59190 212 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 RPS21P63220 83 aaKnown RBP13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 EPS8Q12929 822 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 RAPSNQ13702 412 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 TTC23Q5W5X9 447 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 OR2T5Q6IEZ7 315 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 SPATC1Q76KD6 591 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 OR5D16Q8NGK9 328 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 OR2T29Q8NH02 315 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 HDAC2Q92769 488 aaKnown RBP13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 GTPBP3Q969Y2 492 aaKnown RBP13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 SGPP1Q9BX95 441 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 C6orf62Q9GZU0 229 aaPredicted RBP13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 TMEM168Q9H0V1 697 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 RSPH9Q9H1X1 276 aaPredicted RBP13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 RNF167Q9H6Y7 350 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 CFAP54Q96N23 3096 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 C5orf58C9J3I9 102 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 UGT2B11O75310 529 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 CTHP32929 405 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 ADPRHP54922 357 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 TUBA3CQ13748 450 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 RBM48Q5RL73 367 aaKnown RBP13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 TPRG1LQ5T0D9 272 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 CEACAM20Q6UY09 585 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 C11orf65Q8NCR3 313 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 CLIP3Q96DZ5 547 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 CAMK1GQ96NX5 476 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 PMF1-BGLAPU3KQ54 211 aa13.94□□□□□ -0.18
TRAFD1-201ENST00000257604 PTX3P26022 381 aaPredicted RBP13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 RFX3P48380 749 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 PCYT1AP49585 367 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 RPS3AP61247 264 aaKnown RBP13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 SPIBQ01892 262 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 ID2Q02363 134 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 SCARB2Q14108 478 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 COLEC12Q5KU26 742 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 ANXA8L1Q5VT79 327 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 CYP4Z1Q86W10 505 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 NLGN4XQ8N0W4 816 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 FBXL6Q8N531 539 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 OR8J2Q8NGG1 315 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 LCN9Q8WX39 176 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 SMPDL3AQ92484 453 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 MUL1Q969V5 352 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 RAB7BQ96AH8 199 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 APOOQ9BUR5 198 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 KCNK12Q9HB15 430 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 MRPS30Q9NP92 439 aaKnown RBP13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 DZANK1Q9NVP4 752 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 ADPRHL2Q9NX46 363 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 TBC1D29Q9UFV1 150 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 ASCC3Q8N3C0 2202 aaKnown RBP13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 TCRBV21S2A2A0A5A6 115 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 ZNF99A8MXY4 864 aaPredicted RBP13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 BTN3A3O00478 584 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 CEACAM5P06731 702 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 FURINP09958 794 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 OLR1P78380 273 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 MEX3DQ86XN8 651 aaKnown RBP13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 OR4N5Q8IXE1 308 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 CCDC116Q8IYX3 515 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 FAM160A2Q8N612 972 aaPredicted RBP13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 OSBPL10Q9BXB5 764 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 BRF2Q9HAW0 419 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 AKIP1Q9NQ31 210 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 C8orf4Q9NR00 106 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 ASIC5Q9NY37 505 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 MAN2B2Q9Y2E5 1009 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 PLXND1Q9Y4D7 1925 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 TMPRSS11DO60235 418 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 VIPP01282 170 aa13.93□□□□□ -0.18
TRAFD1-201ENST00000257604 RPN2P04844 631 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms