RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 BRINP2Q9C0B6 783 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 SOX17Q9H6I2 414 aaPredicted RBP13.27□□□□□ -0.29
VPS25-201ENST00000253794 WDR41Q9HAD4 459 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 NPHS2Q9NP85 383 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 TCF7L2Q9NQB0 619 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 TAS2R7Q9NYW3 318 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 KLHL14Q9P2G3 628 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 IL17BQ9UHF5 180 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 EIF3LQ9Y262 564 aaKnown RBP13.27□□□□□ -0.29
VPS25-201ENST00000253794 PTRH2Q9Y3E5 179 aaKnown RBP13.27□□□□□ -0.29
VPS25-201ENST00000253794 ANKRD11Q6UB99 2663 aaPredicted RBP13.27□□□□□ -0.29
VPS25-201ENST00000253794 LAMA5O15230 3695 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 A0A087WV48 116 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 LOC102723996A0A087X1L8 192 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 GOLGA8QA0A0J9YX86 632 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 TCRBV16S1A1N1A0A5B0 115 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 GOLGA8OA6NCC3 632 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 GMNCA6NCL1 334 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 GOLGA8NF8WBI6 632 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 ANKRD28O15084 1053 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 POLR3GO15318 223 aaPredicted RBP13.26□□□□□ -0.29
VPS25-201ENST00000253794 RRP8O43159 456 aaKnown RBP13.26□□□□□ -0.29
VPS25-201ENST00000253794 PRMT3O60678 531 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 DIAPH2O60879 1101 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 CREG1O75629 220 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 IL3P08700 152 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 ALDOCP09972 364 aaKnown RBP13.26□□□□□ -0.29
VPS25-201ENST00000253794 DDCP20711 480 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 MMP11P24347 488 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 DIO3P55073 304 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 GNGT1P63211 74 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 PDE7AQ13946 482 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 CEBPEQ15744 281 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 UGT8Q16880 541 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 CPZQ66K79 652 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 C18orf63Q68DL7 685 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 SPACA3Q8IXA5 215 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 RIMKLAQ8IXN7 391 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 TMEM132CQ8N3T6 1108 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 FAM47BQ8NA70 645 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 MTERF3Q96E29 417 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 IP6K3Q96PC2 410 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 CCNL2Q96S94 520 aaPredicted RBP13.26□□□□□ -0.29
VPS25-201ENST00000253794 CRB3Q9BUF7 120 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 C1orf50Q9BV19 199 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 YIPF2Q9BWQ6 316 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 PRTFDC1Q9NRG1 225 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 AIG1Q9NVV5 245 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 HEY2Q9UBP5 337 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 C3orf18Q9UK00 162 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 ADAM21Q9UKJ8 722 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 MKL2Q9ULH7 1088 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 MAPRE3Q9UPY8 281 aa13.26□□□□□ -0.29
VPS25-201ENST00000253794 EXO1Q9UQ84 846 aaKnown RBP13.26□□□□□ -0.29
VPS25-201ENST00000253794 TGFBR3LH3BV60 316 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 TAF4O00268 1085 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 KLK10O43240 276 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 B4GALT2O60909 372 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 ALOX12BO75342 701 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 HEXBP07686 556 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 G6PDP11413 515 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 IDO1P14902 403 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 DRD4P21917 467 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 EMP2P54851 167 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 CLDN8P56748 225 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 RPS18P62269 152 aaKnown RBP13.25□□□□□ -0.29
VPS25-201ENST00000253794 MC1RQ01726 317 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 ERV3-1Q14264 604 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 GSTA3Q16772 222 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 MINDY4Q4G0A6 757 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 VASH2Q86V25 355 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 TMEM151BQ8IW70 566 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 LIX1Q8N485 282 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 ZCCHC14Q8WYQ9 949 aaKnown RBP13.25□□□□□ -0.29
VPS25-201ENST00000253794 STARD8Q92502 1023 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 ANKRD9Q96BM1 317 aaPredicted RBP13.25□□□□□ -0.29
VPS25-201ENST00000253794 EGLN2Q96KS0 407 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 RBCK1Q9BYM8 510 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 DCTN4Q9UJW0 460 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 GPR45Q9Y5Y3 372 aa13.25□□□□□ -0.29
VPS25-201ENST00000253794 ACACBO00763 2458 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 PGRMC2O15173 223 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 UBDO15205 165 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 EFSO43281 561 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 FGF17O60258 216 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 GPR75O95800 540 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 FURINP09958 794 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 C8orf89P0DMQ9 161 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 WT1P19544 449 aaPredicted RBP13.24□□□□□ -0.29
VPS25-201ENST00000253794 PRPS1L1P21108 318 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 GALNSP34059 522 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 RPL3P39023 403 aaKnown RBP13.24□□□□□ -0.29
VPS25-201ENST00000253794 ATP4BP51164 291 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 SEC24CP53992 1094 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 UCNP55089 124 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 FOXL2P58012 376 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 BTG2P78543 158 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 TLE3Q04726 772 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 IL10RAQ13651 578 aa13.24□□□□□ -0.29
VPS25-201ENST00000253794 SERTAD2Q14140 314 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms