RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 RAD21L1Q9H4I0 556 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 NDRG4Q9ULP0 352 aaKnown RBP15□□□□□ -0.01
LRFN1-201ENST00000248668 MAPRE3Q9UPY8 281 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 NDUFS2O75306 463 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 NME6O75414 186 aaPredicted RBP15□□□□□ -0.01
LRFN1-201ENST00000248668 JUNBP17275 347 aaPredicted RBP15□□□□□ -0.01
LRFN1-201ENST00000248668 PCMT1P22061 227 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 MLLT10P55197 1068 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 DSTNP60981 165 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 MAD2L1BPQ15013 274 aaPredicted RBP15□□□□□ -0.01
LRFN1-201ENST00000248668 FAR1Q8WVX9 515 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 MENTQ9BUN1 341 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 TPK1Q9H3S4 243 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 KLHL31Q9H511 634 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 AHSPQ9NZD4 102 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 SLC6A14Q9UN76 642 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 PRELID1Q9Y255 219 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 PCDHGA10Q9Y5H3 936 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 SCN3AQ9NY46 2000 aa15□□□□□ -0.01
LRFN1-201ENST00000248668 TBC1D3DA0A087WVF3 549 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 TBC1D3IA0A087WXS9 549 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 TBC1D3EA0A087X179 549 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 TBC1D3KA0A087X1G2 549 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 TRBC2A0A5B9 178 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 TBC1D3FA6NER0 549 aaPredicted RBP14.99□□□□□ -0.01
LRFN1-201ENST00000248668 TBC1D3LB9A6J9 549 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 ZNF701M0R085 212 aaPredicted RBP14.99□□□□□ -0.01
LRFN1-201ENST00000248668 TBC1D3HP0C7X1 549 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 MASP1P48740 699 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 PRKAG1P54619 331 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 FCHO2Q0JRZ9 810 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 TOP3AQ13472 1001 aaPredicted RBP14.99□□□□□ -0.01
LRFN1-201ENST00000248668 NR1D2Q14995 579 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 CARTPTQ16568 116 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 UAP1L1Q3KQV9 507 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 TMEM236Q5W0B7 351 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 TBC1D3GQ6DHY5 549 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 TBC1D3CQ6IPX1 549 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 TBC1D3Q8IZP1 549 aaPredicted RBP14.99□□□□□ -0.01
LRFN1-201ENST00000248668 SCAIQ8N9R8 606 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 GOT1L1Q8NHS2 421 aaPredicted RBP14.99□□□□□ -0.01
LRFN1-201ENST00000248668 VANGL1Q8TAA9 524 aaPredicted RBP14.99□□□□□ -0.01
LRFN1-201ENST00000248668 TBC1D15Q8TC07 691 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 RORBQ92753 470 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 MUL1Q969V5 352 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 YIPF4Q9BSR8 244 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 LHX9Q9NQ69 397 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 SCN3BQ9NY72 215 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 PDPK1O15530 556 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 DDCP20711 480 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 POU1F1P28069 291 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 CD6P30203 668 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 GABARAPL2P60520 117 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 ZNF750Q32MQ0 723 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 SYCE2Q6PIF2 218 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 ENTHD1Q8IYW4 607 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 BORCS5Q969J3 196 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 ZNF300Q96RE9 604 aaPredicted RBP14.99□□□□□ -0.01
LRFN1-201ENST00000248668 SIAEQ9HAT2 523 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 CD93Q9NPY3 652 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 PADI2Q9Y2J8 665 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 ZNF99A8MXY4 864 aaPredicted RBP14.99□□□□□ -0.01
LRFN1-201ENST00000248668 C5orf58C9J3I9 102 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 NDUFS4O43181 175 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 BCAS1O75363 584 aaPredicted RBP14.99□□□□□ -0.01
LRFN1-201ENST00000248668 RPN2P04844 631 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 CCDC159P0C7I6 412 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 SSR2P43308 183 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 BMXP51813 675 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 CLDN2P57739 230 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 RPA4Q13156 261 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 FAHD1Q6P587 224 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 OR5D16Q8NGK9 328 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 DNASE1L2Q92874 299 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 RSPH9Q9H1X1 276 aaPredicted RBP14.99□□□□□ -0.01
LRFN1-201ENST00000248668 RABL2AQ9UBK7 228 aaPredicted RBP14.99□□□□□ -0.01
LRFN1-201ENST00000248668 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.99□□□□□ -0.01
LRFN1-201ENST00000248668 NOX1Q9Y5S8 564 aa14.99□□□□□ -0.01
LRFN1-201ENST00000248668 MUC22E2RYF6 1773 aaPredicted RBP14.98□□□□□ -0.01
LRFN1-201ENST00000248668 IGKV1-8A0A0C4DH67 115 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 B4GALT2O60909 372 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 WBP4O75554 376 aaKnown RBP14.98□□□□□ -0.01
LRFN1-201ENST00000248668 ERAL1O75616 437 aaKnown RBP14.98□□□□□ -0.01
LRFN1-201ENST00000248668 LCKP06239 509 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 TGFBR1P36897 503 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 MVKQ03426 396 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 IL18R1Q13478 541 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 KEAP1Q14145 624 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 PPP2R2DQ66LE6 453 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 DHRS4L2Q6PKH6 230 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 DGLUCYQ7Z3D6 616 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 SNX29P2Q8IUI4 249 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 P3H2Q8IVL5 708 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 TMEM145Q8NBT3 493 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 RAB2BQ8WUD1 216 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 PROX1Q92786 737 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 PHPT1Q9NRX4 125 aaPredicted RBP14.98□□□□□ -0.01
LRFN1-201ENST00000248668 PSME2Q9UL46 239 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 TPRKBQ9Y3C4 175 aa14.98□□□□□ -0.01
LRFN1-201ENST00000248668 PCDHGA6Q9Y5G7 932 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms