RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 NDOR1Q9UHB4 597 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 MMP17Q9ULZ9 603 aa19.62■□□□□ 0.73
SNX3-201ENST00000230085 HMX3A6NHT5 357 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 A8MU76 341 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 KIAA0513O60268 411 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 ATG13O75143 517 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 ZNF821O75541 412 aaPredicted RBP19.61■□□□□ 0.73
SNX3-201ENST00000230085 STSP08842 583 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 HOXB2P14652 356 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 CXCR2P25025 360 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 VASPP50552 380 aaPredicted RBP19.61■□□□□ 0.73
SNX3-201ENST00000230085 RGNQ15493 299 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 ZXDCQ2QGD7 858 aaPredicted RBP19.61■□□□□ 0.73
SNX3-201ENST00000230085 KIAA1211LQ6NV74 962 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 SYT12Q8IV01 421 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 SPEM1Q8N4L4 309 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 CLDN19Q8N6F1 224 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 CELF2-AS1Q8N7Q2 184 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 ASB11Q8WXH4 323 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 BRF2Q9HAW0 419 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 DNAJC11Q9NVH1 559 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 BTBD3Q9Y2F9 522 aa19.61■□□□□ 0.73
SNX3-201ENST00000230085 CXorf51AA0A1B0GTR3 108 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 A0A1W2PQF6 199 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 GFYI3L273 518 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 DLL1O00548 723 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 SCAMP2O15127 329 aaKnown RBP19.6■□□□□ 0.73
SNX3-201ENST00000230085 GPR37L1O60883 481 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 GCM2O75603 506 aaPredicted RBP19.6■□□□□ 0.73
SNX3-201ENST00000230085 LGI1O95970 557 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 RHOAP61586 193 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 CAMK2BQ13554 666 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 PTPRRQ15256 657 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 HNRNPA1L2Q32P51 320 aaKnown RBP19.6■□□□□ 0.73
SNX3-201ENST00000230085 EOGTQ5NDL2 527 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 C6orf183Q5T699 404 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 ZNF621Q6ZSS3 439 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 SYT13Q7L8C5 426 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 SLC5A8Q8N695 610 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 MGLLQ99685 303 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 SLA2Q9H6Q3 261 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 ZDHHC3Q9NYG2 299 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 GPR83Q9NYM4 423 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 ZNF282Q9UDV7 671 aaPredicted RBP19.6■□□□□ 0.73
SNX3-201ENST00000230085 CRLS1Q9UJA2 301 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 IQCMA0A1B0GVH7 501 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 BNIP3LO60238 219 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 SEMA3DO95025 777 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 BPIP17213 487 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 COL9A1P20849 921 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 ITGB7P26010 798 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 AVPR2P30518 371 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 HNF4AP41235 474 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 IFI44LQ53G44 452 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 MEDAGQ5VYS4 303 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 FAM92BQ6ZTR7 304 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 Q6ZVU0 165 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 LIX1LQ8IVB5 337 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 VPS37AQ8NEZ2 397 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 WDR20Q8TBZ3 569 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 Q96MT0 163 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 TMEM38AQ9H6F2 299 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 RUBCNLQ9H714 662 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 SMURF1Q9HCE7 757 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 RAD18Q9NS91 495 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 FZD4Q9ULV1 537 aa19.6■□□□□ 0.73
SNX3-201ENST00000230085 FNDC3AQ9Y2H6 1198 aaKnown RBP19.6■□□□□ 0.73
SNX3-201ENST00000230085 CFAP20Q9Y6A4 193 aaKnown RBP19.6■□□□□ 0.73
SNX3-201ENST00000230085 CKAP5Q14008 2032 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 LOC100506127A0A0U1RQW1 187 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 PRR33A8MZF0 331 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 ARHGAP33O14559 1287 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 SCG5P05408 212 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 COX7A2P14406 83 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 ITGB6P18564 788 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 TNFSF8P32971 234 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 NKX2-5P52952 324 aaPredicted RBP19.59■□□□□ 0.73
SNX3-201ENST00000230085 TMEM201Q5SNT2 666 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 C9orf64Q5T6V5 341 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 PLAG1Q6DJT9 500 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 C22orf39Q6P5X5 142 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 RAB43Q86YS6 212 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 SLC44A2Q8IWA5 706 aaPredicted RBP19.59■□□□□ 0.73
SNX3-201ENST00000230085 MTFMTQ96DP5 389 aaKnown RBP19.59■□□□□ 0.73
SNX3-201ENST00000230085 CHCHD6Q9BRQ6 235 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 DUSP26Q9BV47 211 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 TM6SF2Q9BZW4 377 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 SYNDIG1Q9H7V2 258 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 PRSS16Q9NQE7 514 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 TAS2R9Q9NYW1 312 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 VPS29Q9UBQ0 182 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 V9GYH0 126 aa19.59■□□□□ 0.73
SNX3-201ENST00000230085 DSPPQ9NZW4 1301 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 A0A0U1RQS6 177 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 ZAR1LA6NP61 321 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 RNASET2O00584 256 aaKnown RBP19.58■□□□□ 0.73
SNX3-201ENST00000230085 PRAMEF4O60810 478 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 CBLP22681 906 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 CDC42P60953 191 aa19.58■□□□□ 0.73
SNX3-201ENST00000230085 ASAH1Q13510 395 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms