RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 SPACA6W5XKT8 324 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 ARHGAP10A1A4S6 786 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 CCDC151A5D8V7 595 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 SAGE2PA6NJ88 616 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 GLOD5A6NK44 160 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 PROM1O43490 865 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 TYROBPO43914 113 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 FGF17O60258 216 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 MAN1A2O60476 641 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 TRIM13O60858 407 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 ULK1O75385 1050 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 ERLIN1O75477 346 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 MYO1DO94832 1006 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 SEMA3DO95025 777 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 F10P00742 488 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 IFNA16P05015 189 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 TPP2P29144 1249 aaPredicted RBP11.86□□□□□ -0.51
LSM5-201ENST00000223084 SERPINB3P29508 390 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 ARFIP1P53367 373 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 MLLT10P55197 1068 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 HMGCS1Q01581 520 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 TNFRSF17Q02223 184 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 TLE1Q04724 770 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 GALNT1Q10472 559 aaPredicted RBP11.86□□□□□ -0.51
LSM5-201ENST00000223084 TBL3Q12788 808 aaKnown RBP11.86□□□□□ -0.51
LSM5-201ENST00000223084 STX4Q12846 297 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 CRB2Q5IJ48 1285 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 C10orf62Q5T681 223 aaPredicted RBP11.86□□□□□ -0.51
LSM5-201ENST00000223084 IGFL2Q6UWQ7 119 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 IGFL3Q6UXB1 125 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 COMMD6Q7Z4G1 85 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 EXOC3L1Q86VI1 746 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 C1orf52Q8N6N3 182 aaKnown RBP11.86□□□□□ -0.51
LSM5-201ENST00000223084 Q8NA96 180 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 CATSPER1Q8NEC5 780 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 CNDP1Q96KN2 507 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 LMF1Q96S06 567 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 NPAS2Q99743 824 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 ACPTQ9BZG2 426 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 EPS8L2Q9H6S3 715 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 RPF2Q9H7B2 306 aaKnown RBP11.86□□□□□ -0.51
LSM5-201ENST00000223084 BRF2Q9HAW0 419 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 MMP25Q9NPA2 562 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 LYARQ9NX58 379 aaKnown RBP11.86□□□□□ -0.51
LSM5-201ENST00000223084 AHSPQ9NZD4 102 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 PHF11Q9UIL8 331 aa11.86□□□□□ -0.51
LSM5-201ENST00000223084 CPAMD8Q8IZJ3 1885 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 PGRMC2O15173 223 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 AIFM1O95831 613 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 HSD3B1P14060 373 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 HSD3B2P26439 372 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 TLX1P31314 330 aaPredicted RBP11.85□□□□□ -0.51
LSM5-201ENST00000223084 AP2B1P63010 937 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 FOLH1Q04609 750 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 BTKQ06187 659 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 ZNF33BQ06732 778 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 TNFAIP8L3Q5GJ75 292 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 CCNYL2Q5T2Q4 361 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 CLEC6AQ6EIG7 209 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 LRIG3Q6UXM1 1119 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 ZCCHC23Q6ZST2 131 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 HPS6Q86YV9 775 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 CRLF3Q8IUI8 442 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 DNAJB14Q8TBM8 379 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 ELP5Q8TE02 316 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 DOK4Q8TEW6 326 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 SREK1Q8WXA9 508 aaKnown RBP11.85□□□□□ -0.51
LSM5-201ENST00000223084 TM9SF4Q92544 642 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 PNPLA2Q96AD5 504 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 ADAP2Q9NPF8 381 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 TEX10Q9NXF1 929 aaPredicted RBP11.85□□□□□ -0.51
LSM5-201ENST00000223084 MS4A12Q9NXJ0 267 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 STMN3Q9NZ72 180 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 SENP1Q9P0U3 644 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 VPS29Q9UBQ0 182 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 B3GNT3Q9Y2A9 372 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 CROCCQ5TZA2 2017 aa11.85□□□□□ -0.51
LSM5-201ENST00000223084 TRBV11-1A0A0K0K1C0 115 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 A0A1W2PS29 197 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 BLACEA4D250 179 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 TTLL8A6PVC2 850 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 CYSRT1A8MQ03 144 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 CTIFO43310 598 aaKnown RBP11.84□□□□□ -0.51
LSM5-201ENST00000223084 CRCPO75575 148 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 SORBS2O94875 1100 aaKnown RBP11.84□□□□□ -0.51
LSM5-201ENST00000223084 WDPCPO95876 746 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 CHRNGP07510 517 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 NR2F6P10588 404 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 BUD31P41223 144 aaPredicted RBP11.84□□□□□ -0.51
LSM5-201ENST00000223084 ETV4P43268 484 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 MAPK12P53778 367 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 NAA20P61599 178 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 ARG2P78540 354 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 CSTF3Q12996 717 aaKnown RBP11.84□□□□□ -0.51
LSM5-201ENST00000223084 IGFBP7Q16270 282 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 PRR30Q53SZ7 412 aaPredicted RBP11.84□□□□□ -0.51
LSM5-201ENST00000223084 ACER2Q5QJU3 275 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 H3F3CQ6NXT2 135 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 DGAT2L6Q6ZPD8 337 aa11.84□□□□□ -0.51
LSM5-201ENST00000223084 Q6ZS92 163 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms