RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 SLC6A16Q9GZN6 736 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 MPZL2O60487 215 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 UGDHO60701 494 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 PRKAG1P54619 331 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 LIM2P55344 173 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 RAB25P57735 213 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 TCTN1Q2MV58 587 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 ARSIQ5FYB1 569 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 ATAT1Q5SQI0 421 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 PAMR1Q6UXH9 720 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 IGSF21Q96ID5 467 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 CASP8AP2Q9UKL3 1982 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 NOTOA8MTQ0 251 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 EIF3FO00303 357 aaPredicted RBP16.4■□□□□ 0.22
H2AFV-201ENST00000222690 CPNE3O75131 537 aaKnown RBP16.4■□□□□ 0.22
H2AFV-201ENST00000222690 CSTF2P33240 577 aaKnown RBP eCLIP16.4■□□□□ 0.22
H2AFV-201ENST00000222690 ZNF91Q05481 1191 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 PIN1Q13526 163 aaPredicted RBP16.4■□□□□ 0.22
H2AFV-201ENST00000222690 RASGEF1AQ8N9B8 481 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 ZNF480Q8WV37 535 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 ITM2BQ9Y287 266 aa16.4■□□□□ 0.22
H2AFV-201ENST00000222690 OR6C70A6NIJ9 312 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 ZAR1LA6NP61 321 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 CBLP22681 906 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 RFX2P48378 723 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 FCHO2Q0JRZ9 810 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 SEC23BQ15437 767 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 XAGE5Q8WWM1 108 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 EXOSC8Q96B26 276 aaKnown RBP16.39■□□□□ 0.21
H2AFV-201ENST00000222690 GFM1Q96RP9 751 aaKnown RBP16.39■□□□□ 0.21
H2AFV-201ENST00000222690 SPNS1Q9H2V7 528 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 BRF2Q9HAW0 419 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 SEC14L3Q9UDX4 400 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 INSL5Q9Y5Q6 135 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 SH3D21A4FU49 640 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 HOXA2O43364 376 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 GPR37L1O60883 481 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 SEMA3DO95025 777 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 IGHA2P01877 340 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 SCG5P05408 212 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 FURINP09958 794 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 HEPACAMQ14CZ8 416 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 MPEG1Q2M385 716 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 CRTC2Q53ET0 693 aaPredicted RBP16.39■□□□□ 0.21
H2AFV-201ENST00000222690 OR2G6Q5TZ20 316 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 REEP3Q6NUK4 255 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 SYT14Q8NB59 555 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 AP2M1Q96CW1 435 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 REPS1Q96D71 796 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 LYSMD1Q96S90 227 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 LINC00597Q9H2U6 94 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 CNOT2Q9NZN8 540 aaKnown RBP16.39■□□□□ 0.21
H2AFV-201ENST00000222690 KLHL42Q9P2K6 505 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 SEC14L4Q9UDX3 406 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 SNX7Q9UNH6 387 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 CLCA3PQ9Y6N3 262 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 IGLV3-16A0A075B6K0 115 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 CAPN5O15484 640 aaPredicted RBP16.39■□□□□ 0.21
H2AFV-201ENST00000222690 NME6O75414 186 aaPredicted RBP16.39■□□□□ 0.21
H2AFV-201ENST00000222690 LEFTY1O75610 366 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 RBBP4Q09028 425 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 COL9A2Q14055 689 aaPredicted RBP16.39■□□□□ 0.21
H2AFV-201ENST00000222690 NFE2L1Q14494 772 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 TMEM25Q86YD3 366 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 ST6GAL2Q96JF0 529 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 SLX1AQ9BQ83 275 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 MND1Q9BWT6 205 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 SLC22A4Q9H015 551 aa16.39■□□□□ 0.21
H2AFV-201ENST00000222690 PIPSLA2A3N6 862 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 HBQ1P09105 142 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 PSKH1P11801 424 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 HSD3B1P14060 373 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 CXCR2P25025 360 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 HSD3B2P26439 372 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 SDC2P34741 201 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 TMEM115Q12893 351 aaPredicted RBP16.38■□□□□ 0.21
H2AFV-201ENST00000222690 GPR50Q13585 617 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 PUM1Q14671 1186 aaKnown RBP eCLIP16.38■□□□□ 0.21
H2AFV-201ENST00000222690 SLCO4C1Q6ZQN7 724 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 FIBINQ8TAL6 211 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 TMEM19Q96HH6 336 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 SMAD5Q99717 465 aaKnown RBP16.38■□□□□ 0.21
H2AFV-201ENST00000222690 TM9SF2Q99805 663 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 SPG21Q9NZD8 308 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 FTSJ1Q9UET6 329 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 ABT1Q9ULW3 272 aaKnown RBP16.38■□□□□ 0.21
H2AFV-201ENST00000222690 STUB1Q9UNE7 303 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 PRKAB1Q9Y478 270 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 SLC28A2O43868 658 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 MYL12AP19105 171 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 MYL9P24844 172 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 HOXC5Q00444 222 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 CAP1Q01518 475 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 ZNF79Q15937 498 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 SYCE2Q6PIF2 218 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.38■□□□□ 0.216e-9■■■□□ 16.6
H2AFV-201ENST00000222690 GLCCI1Q86VQ1 547 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 LSRQ86X29 649 aaPredicted RBP16.38■□□□□ 0.21
H2AFV-201ENST00000222690 MTERF3Q96E29 417 aa16.38■□□□□ 0.21
H2AFV-201ENST00000222690 FCRL1Q96LA6 429 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms