RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Zyg11bQ3UFS0 744 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Clca4bQ3UW98 925 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Wdr18Q4VBE8 431 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Vamp1Q62442 118 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 CilpQ66K08 1184 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 NanogQ80Z64 305 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Csnka2ipQ8CH19 720 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gfm1Q8K0D5 751 aaKnown RBP9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Galnt18Q8K1B9 622 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tor2aQ8R1J9 321 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 CtbsQ8R242 366 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Vmn1r228Q8R2A7 333 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr1389Q8VGX0 311 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Sfxn5Q925N0 342 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Acot13Q9CQR4 140 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ndufb7Q9CR61 137 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 2410137M14RikQ9CWF0 162 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ndufaf7Q9CWG8 436 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Zfp623Q9CY99 499 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Naalad2Q9CZR2 740 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Snapc3Q9D2C9 407 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Sult1c2Q9D939 296 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 HrgQ9ESB3 525 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ulk2Q9QY01 1037 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 PrkraQ9WTX2 313 aaKnown RBP9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Zbtb18Q9WUK6 522 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cntnap5aQ0V8T9 1304 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Mtg2A2AFK4 405 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Vmn1r9A2RST7 299 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Nkx6-2D3Z4R4 277 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pcdh10E9PXQ7 1057 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Zfp989H3BLB0 661 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 P01734 135 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Hoxa11P31311 313 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Slc6a1P31648 599 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gabrb1P50571 474 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ddx6P54823 483 aaKnown RBP9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Acot8P58137 320 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Arl4aP61213 200 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Rps8P62242 208 aaKnown RBP9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Il6stQ00560 917 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Atp5a1Q03265 553 aaKnown RBP9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Capn13Q3UW68 665 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 MeikinQ5F2C3 434 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Serpina3gQ5I2A0 440 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 SypQ62277 314 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Med26Q7TN02 588 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 CcnyQ8BGU5 341 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 ArsjQ8BM89 598 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Rft1Q8C3B8 541 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gpn1Q8VCE2 372 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pcdhb11Q91UZ8 797 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Akr1c14Q91WT7 323 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Atg13Q91YI1 516 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Camk1Q91YS8 374 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Atpaf2Q91YY4 289 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Prpsap1Q9D0M1 356 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Hhipl2Q9D2G9 717 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tceal6Q9DB24 200 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Isca2Q9DCB8 154 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Rcan2Q9JHG2 197 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Myoz2Q9JJW5 264 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ccr9Q9WUT7 369 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 TfgQ9Z1A1 397 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Vmn1r10W4VSP8 311 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Trip11E9Q512 1976 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Trbv23A0A0A6YWQ1 115 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm28710A0A1B0GR31 962 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr634-ps1A0A1B0GRN7 318 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr1040A2ARY1 313 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pgm2A2CEK3 580 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tmem229aB9EJI9 371 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm6569D3YTM9 175 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pcdh17E9PXF0 1157 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm28048F7BCN0 99 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Spi1P17433 272 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Bmp7P23359 430 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Man2a1P27046 1150 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 MafbP54841 323 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tspan5P62080 268 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tial1P70318 392 aaKnown RBP9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cdkl4Q3TZA2 342 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Fdxacb1Q3UY23 622 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Mpzl3Q3V3F6 237 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm14851Q5ERJ0 116 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr464Q5SW48 313 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Q6GQU0 248 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Znf503Q7TMA2 652 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cnppd1Q8K158 407 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ppp1r11Q8K1L5 131 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Vmn1r6Q8R2D4 303 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Vmn1r24Q8R2D6 296 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr1324Q8VEU7 332 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr1416Q8VGU4 312 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Twf1Q91YR1 350 aaKnown RBP9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 SardhQ99LB7 919 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Actr6Q9D864 396 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pak1ip1Q9DCE5 382 aaKnown RBP9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pard6gQ9JK84 382 aa9.34□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Mbtps1Q9WTZ2 1052 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms