RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Mad2l1Q9Z1B5 205 aa21.78■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Gh1P06880 216 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Clec2lP0C7M9 211 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 DckP43346 260 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Hddc2Q3SXD3 199 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Gm4951Q3UED7 406 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Nsg1Q62092 185 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Usp7Q6A4J8 1103 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Slco4c1Q8BGD4 722 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Atxn7l2Q8C8K6 696 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Prmt5Q8CIG8 637 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Snrnp27Q8K194 155 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 IlkapQ8R0F6 392 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Q9D3J9 298 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Tmem8aQ9ESN3 769 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Gsk3bQ9WV60 420 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Notch4P31695 1964 aa21.77■■□□□ 1.08
Upf3a-201ENSMUST00000043767 Xlr5bA2BI50 236 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 ApoeP08226 311 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 P2ry2P35383 373 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Tia1P52912 386 aaKnown RBP21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Mapk1P63085 358 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Kcnk6Q3TBV4 313 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Olfr12Q60894 333 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Adamts16Q69Z28 1222 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 AstlQ6HA09 435 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Rbbp8Q80YR6 893 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Rbms3Q8BWL5 431 aaKnown RBP21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Pias2Q8C5D8 621 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Spin4Q8K1L2 249 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Vmn1r198Q8R263 300 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Gpn2Q8VEJ1 310 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Pcdhb20Q91XZ9 799 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Nuf2Q99P69 463 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Tmem9Q9CR23 183 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Idh3aQ9D6R2 366 aaKnown RBP21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 AgtrapQ9WVK0 161 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Prob1A0A087WR45 1010 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 A0A1L1ST33 502 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 TprnA2AI08 749 aaKnown RBP21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Ajap1A2ALI5 412 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 S100zB9EJL3 99 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Vmn2r97K7N6Z2 861 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Vmn2r93L7N1Z9 857 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Sult2b1O35400 338 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Sh3pxd2aO89032 1124 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 PlaaP27612 794 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 RxrgP28705 463 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Ffar3Q3UFD7 319 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Sorbs2Q3UTJ2 1180 aaKnown RBP21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Btnl1Q7TST0 509 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Mrps35Q8BJZ4 320 aaKnown RBP21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Kctd11Q8K485 232 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Slc35a5Q921R7 437 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 H2bfmQ9DAB5 224 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Ninj2Q9JL89 143 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Zbtb18Q9WUK6 522 aa21.76■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Gm4869A0A1B0GSG7 984 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Gm5938A2AEN9 163 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Vmn1r177E9PXM3 309 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Gm14139F6ZS36 494 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Zfp934K7N6H3 473 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Foxd2O35392 492 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Sp3O70494 783 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Cpa3P15089 417 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Krt2Q3TTY5 707 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Xrcc1Q60596 631 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Ei24Q61070 340 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Abcb7Q61102 752 aaKnown RBP21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 DgkbQ6NS52 802 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 GgnQ80WJ1 673 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Pcdh20Q8BIZ0 952 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Slc24a5Q8C261 501 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Cstf2tQ8C7E9 632 aaKnown RBP21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Olfr677Q8VF06 312 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Smap1Q91VZ6 440 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Dach2Q925Q8 634 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Nck1Q99M51 377 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Cops7aQ9CZ04 275 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Khdrbs2Q9WU01 349 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Ybx2Q9Z2C8 360 aaKnown RBP21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Osbpl10S4R1M9 766 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 AtmQ62388 3066 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Vmn1r90A0A087WR36 309 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 1810010D01RikA0A1L1SR87 51 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Cd300ld2A2A7W0 305 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Gm14295A2BG91 834 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Gm340F6RGI3 1242 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Vmn2r102L7N279 857 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 EmdO08579 259 aaKnown RBP21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 H2-Q1O19441 368 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Cntn1P12960 1020 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Serpind1P49182 478 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 FcamrQ2TB54 535 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Q3U7U4 132 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Olfr325Q5NCD2 326 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Lacc1Q8BZT9 430 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Olfr77Q8VEY9 312 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Olfr351Q8VGK1 310 aa21.75■■□□□ 1.07
Upf3a-201ENSMUST00000043767 Man2c1Q91W89 1039 aa21.75■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms