RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 C11orf16Q9NQ32 467 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 SPG21Q9NZD8 308 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 MAPRE3Q9UPY8 281 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 HELZP42694 1942 aaKnown RBP13.2□□□□□ -0.3
PHGDH-233ENST00000642021 CCRL2O00421 344 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 ZNF197O14709 1029 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 DYRK3O43781 588 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 SOX14O95416 240 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 IL3P08700 152 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 TNFSF8P32971 234 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 RPS19P39019 145 aaKnown RBP13.19□□□□□ -0.3
PHGDH-233ENST00000642021 ETV6P41212 452 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 SOX3P41225 446 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 PCYT1AP49585 367 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 SEC23BQ15437 767 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 ZNF630Q2M218 657 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-233ENST00000642021 SPANXN2Q5MJ10 180 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 CFAP206Q8IYR0 622 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 LSM14AQ8ND56 463 aaKnown RBP13.19□□□□□ -0.3
PHGDH-233ENST00000642021 VWCEQ96DN2 955 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 TRMT61AQ96FX7 289 aaKnown RBP13.19□□□□□ -0.3
PHGDH-233ENST00000642021 NRTNQ99748 197 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 CNPPD1Q9BV87 410 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 CXorf36Q9H7Y0 433 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 RC3H2Q9HBD1 1191 aaKnown RBP13.19□□□□□ -0.3
PHGDH-233ENST00000642021 HCFC1R1Q9NWW0 138 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 MKLN1Q9UL63 735 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 COL4A6Q14031 1691 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 EFCAB10A6NFE3 127 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 WWP2O00308 870 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 FOXE1O00358 373 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-233ENST00000642021 AP3D1O14617 1153 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 CYP7B1O75881 506 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 C1GALT1C1LP0DN25 315 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 RHCEP18577 417 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 RECQLP46063 649 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-233ENST00000642021 TGM4P49221 684 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 LRRC74AQ0VAA2 488 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 ELOAQ14241 798 aaKnown RBP13.19□□□□□ -0.3
PHGDH-233ENST00000642021 ZNF284Q2VY69 593 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 LAS2Q8IYD9 372 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 C2orf73Q8N5S3 287 aaPredicted RBP13.19□□□□□ -0.3
PHGDH-233ENST00000642021 TIFAQ96CG3 184 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 MAPKAP1Q9BPZ7 522 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 MARCH7Q9H992 704 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 TAAR2Q9P1P5 351 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 MUTYHQ9UIF7 546 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 ALPK3Q96L96 1907 aa13.19□□□□□ -0.3
PHGDH-233ENST00000642021 H3BQ06 376 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-233ENST00000642021 ALDH1A1P00352 501 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 TAP2Q03519 686 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 ZNF658BQ4V348 819 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-233ENST00000642021 BCL7AQ4VC05 210 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 ZMAT1Q5H9K5 638 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 RBM45Q8IUH3 476 aaKnown RBP13.18□□□□□ -0.3
PHGDH-233ENST00000642021 SLC44A2Q8IWA5 706 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-233ENST00000642021 C9orf43Q8TAL5 461 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-233ENST00000642021 APOBEC4Q8WW27 367 aaKnown RBP13.18□□□□□ -0.3
PHGDH-233ENST00000642021 AP2M1Q96CW1 435 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 FOPNLQ96NB1 174 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 ABCG4Q9H172 646 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 SLC25A19Q9HC21 320 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 EXOSC4Q9NPD3 245 aaKnown RBP13.18□□□□□ -0.3
PHGDH-233ENST00000642021 SLAMF7Q9NQ25 335 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 CNOT2Q9NZN8 540 aaKnown RBP13.18□□□□□ -0.3
PHGDH-233ENST00000642021 REV1Q9UBZ9 1251 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 KLHL3Q9UH77 587 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 TBC1D24Q9ULP9 559 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 NINQ8N4C6 2090 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 SH3D21A4FU49 640 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 LOC110117498-PIK3R3F6TDL0 507 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 SNX4O95219 450 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 IFNW1P05000 195 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 TYRP14679 529 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 SOX6P35712 828 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 METAP1P53582 386 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 NXNL2Q5VZ03 156 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 TNFAIP8L2Q6P589 184 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-233ENST00000642021 VN1R5Q7Z5H4 357 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 GPR32P1Q8NGA4 272 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 CAPSLQ8WWF8 208 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 TCEAL4Q96EI5 215 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 NEDD4LQ96PU5 975 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 MYNNQ9NPC7 610 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 CLN6Q9NWW5 311 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 DNAJC27Q9NZQ0 273 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 KCND3Q9UK17 655 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 CFL2Q9Y281 166 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 DSPPQ9NZW4 1301 aa13.18□□□□□ -0.3
PHGDH-233ENST00000642021 CXorf51AA0A1B0GTR3 108 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 K7ESM1 405 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 LILRB3O75022 631 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 TCEA1P23193 301 aaKnown RBP13.17□□□□□ -0.3
PHGDH-233ENST00000642021 WEE1P30291 646 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 LRRC26Q2I0M4 334 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 PAQR6Q6TCH4 344 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 CEACAM20Q6UY09 585 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 LIPIQ6XZB0 460 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 DDX53Q86TM3 631 aaKnown RBP13.17□□□□□ -0.3
PHGDH-233ENST00000642021 LRRC56Q8IYG6 542 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms