RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 SPIN4Q56A73 249 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 LANCL3Q6ZV70 420 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 CLNKQ7Z7G1 428 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 MRGPREQ86SM8 312 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 RAB43Q86YS6 212 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 AMER2Q8N7J2 671 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 ADAMTS18Q8TE60 1221 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 C11orf24Q96F05 449 aaPredicted RBP12.42□□□□□ -0.42
GTF3A-209ENST00000640289 PTCHD1Q96NR3 888 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 NUF2Q9BZD4 464 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 LRTM1Q9HBL6 345 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 SLCO1B3Q9NPD5 702 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 NECTIN3Q9NQS3 549 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 PRTFDC1Q9NRG1 225 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 SEMA3GQ9NS98 782 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 MCM8Q9UJA3 840 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 HS3ST3B1Q9Y662 390 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 IGF2RP11717 2491 aa12.42□□□□□ -0.42
GTF3A-209ENST00000640289 IGHV3-20A0A0C4DH32 117 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 A0A1W2PR48 441 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 GLOD5A6NK44 160 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 NPIPB8E9PQR5 432 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 TGFBR3LH3BV60 316 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 PROM1O43490 865 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 PRMT3O60678 531 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 LDB3O75112 727 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 PEX11AO75192 247 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 AIFM1O95831 613 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 IGHEP01854 428 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 C8orf89P0DMQ9 161 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 PRPH2P23942 346 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 RPL38P63173 70 aaKnown RBP12.41□□□□□ -0.42
GTF3A-209ENST00000640289 TNFRSF17Q02223 184 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 EEF1A2Q05639 463 aaKnown RBP12.41□□□□□ -0.42
GTF3A-209ENST00000640289 KIAA0040Q15053 153 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 COL28A1Q2UY09 1125 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 DEFB109BQ30KR1 87 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 RFTN2Q52LD8 501 aaPredicted RBP12.41□□□□□ -0.42
GTF3A-209ENST00000640289 CRTC2Q53ET0 693 aaPredicted RBP12.41□□□□□ -0.42
GTF3A-209ENST00000640289 TMEM205Q6UW68 189 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 QSOX2Q6ZRP7 698 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 FAM47EQ6ZV65 393 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 MED25Q71SY5 747 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 SCUBE1Q8IWY4 988 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 ZNF595Q8IYB9 648 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 MMP21Q8N119 569 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 ARFGAP2Q8N6H7 521 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 PLPP5Q8NEB5 264 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 PCSK5Q92824 1860 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 TM4SF18Q96CE8 201 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 C19orf60Q96EN9 201 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 MAGEB18Q96M61 343 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 PRORYQ9H606 182 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 C1orf109Q9NX04 203 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 SIRT5Q9NXA8 310 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 PHF11Q9UIL8 331 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 MRPS33Q9Y291 106 aaKnown RBP12.41□□□□□ -0.42
GTF3A-209ENST00000640289 CLDN16Q9Y5I7 305 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 SPACA6W5XKT8 324 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 URB1O60287 2271 aaKnown RBP12.41□□□□□ -0.42
GTF3A-209ENST00000640289 ZFHX4Q86UP3 3567 aa12.41□□□□□ -0.42
GTF3A-209ENST00000640289 IGKV3D-11A0A0A0MRZ8 115 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 GNG14A0A1W2PPG7 69 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 ARGFXA6NJG6 315 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 PGRMC2O15173 223 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 FGF17O60258 216 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 ANXA4P09525 319 aaPredicted RBP12.4□□□□□ -0.42
GTF3A-209ENST00000640289 NR2F6P10588 404 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 BUD31P41223 144 aaPredicted RBP12.4□□□□□ -0.42
GTF3A-209ENST00000640289 HK2P52789 917 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 HSD17B7P56937 341 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 TAS2R50P59544 299 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 ID2Q02363 134 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 CHAF1BQ13112 559 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 SLC13A2Q13183 592 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 NSDHLQ15738 373 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 NDUFAF5Q5TEU4 345 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 NOXRED1Q6NXP6 359 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 GALNT18Q6P9A2 607 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 KIRREL2Q6UWL6 708 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 ANKRD37Q7Z713 158 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 CRLF3Q8IUI8 442 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 WDR75Q8IWA0 830 aaKnown RBP12.4□□□□□ -0.42
GTF3A-209ENST00000640289 HOMEZQ8IX15 550 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 OR4N5Q8IXE1 308 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 OR11G2Q8NGC1 345 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 C16orf78Q8WTQ4 265 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 SNRNP27Q8WVK2 155 aaKnown RBP12.4□□□□□ -0.42
GTF3A-209ENST00000640289 METTL21AQ8WXB1 218 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 TUBGCP3Q96CW5 907 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 C7orf26Q96N11 449 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 RPF2Q9H7B2 306 aaKnown RBP12.4□□□□□ -0.42
GTF3A-209ENST00000640289 PRDM9Q9NQV7 894 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 P4HTMQ9NXG6 502 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 MS4A12Q9NXJ0 267 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 POLHQ9Y253 713 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 MAN2B2Q9Y2E5 1009 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 DLGAP4Q9Y2H0 992 aa12.4□□□□□ -0.42
GTF3A-209ENST00000640289 CLDN4O14493 209 aa12.39□□□□□ -0.43
GTF3A-209ENST00000640289 CTNSO60931 367 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms