RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 PSMB5P28074 263 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 ACADVLP49748 655 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 FOXA1P55317 472 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 MXD1Q05195 221 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 SYT16Q17RD7 645 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 WSCD2Q2TBF2 565 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 TMEM35AQ53FP2 167 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 NDUFAF5Q5TEU4 345 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 B3GNT6Q6ZMB0 384 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 RNF111Q6ZNA4 994 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 KDM1BQ8NB78 822 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 SH3GL3Q99963 347 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 LRIT1Q9P2V4 623 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 IFI30P13284 250 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 UQCRC2P22695 453 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 FMO3P31513 532 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 RHDQ02161 417 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 NFATC4Q14934 902 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 PERM1Q5SV97 790 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 SLC35F1Q5T1Q4 408 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 BTN2A1Q7KYR7 527 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 LAPTM4BQ86VI4 370 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 CHERPQ8IWX8 916 aaKnown RBP13.03□□□□□ -0.32
SCARB2-215ENST00000639145 OR6N1Q8NGY5 312 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 ZNF483Q8TF39 744 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-215ENST00000639145 ZNF480Q8WV37 535 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 ADAMTS6Q9UKP5 1117 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 CACNA1CQ13936 2221 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 SOX1O00570 391 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-215ENST00000639145 RENP00797 406 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 PORP16435 677 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-215ENST00000639145 PTGER1P34995 402 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 PLCXD2Q0VAA5 305 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 PTGES3Q15185 160 aaKnown RBP13.03□□□□□ -0.32
SCARB2-215ENST00000639145 ALPK1Q96QP1 1244 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 THAP10Q9P2Z0 257 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-215ENST00000639145 MKLN1Q9UL63 735 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 NCOR1O75376 2440 aa13.03□□□□□ -0.32
SCARB2-215ENST00000639145 LAMB1P07942 1786 aa13.02□□□□□ -0.32
SCARB2-215ENST00000639145 A6NCN8 305 aa13.02□□□□□ -0.32
SCARB2-215ENST00000639145 PRLP01236 227 aa13.02□□□□□ -0.32
SCARB2-215ENST00000639145 F3P13726 295 aa13.02□□□□□ -0.32
SCARB2-215ENST00000639145 ACVR2AP27037 513 aa13.02□□□□□ -0.32
SCARB2-215ENST00000639145 BMP8BP34820 402 aa13.02□□□□□ -0.32
SCARB2-215ENST00000639145 SEMA3BQ13214 749 aa13.02□□□□□ -0.32
SCARB2-215ENST00000639145 TCTE1Q5JU00 501 aa13.02□□□□□ -0.32
SCARB2-215ENST00000639145 NIPAL1Q6NVV3 410 aa13.02□□□□□ -0.32
SCARB2-215ENST00000639145 BMP8AQ7Z5Y6 402 aa13.02□□□□□ -0.32
SCARB2-215ENST00000639145 AQP11Q8NBQ7 271 aa13.02□□□□□ -0.32
SCARB2-215ENST00000639145 PRR11Q96HE9 360 aaPredicted RBP13.02□□□□□ -0.32
SCARB2-215ENST00000639145 CRNNQ9UBG3 495 aaPredicted RBP13.02□□□□□ -0.32
SCARB2-215ENST00000639145 CKLFQ9UBR5 152 aa13.02□□□□□ -0.32
SCARB2-215ENST00000639145 PAPPA2Q9BXP8 1791 aa13.02□□□□□ -0.32
SCARB2-215ENST00000639145 PRRT4C9JH25 899 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 EMC8O43402 210 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 SNTA1Q13424 505 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 TAZQ16635 292 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 FAM109BQ6ICB4 259 aaPredicted RBP13.02□□□□□ -0.33
SCARB2-215ENST00000639145 ZCCHC12Q6PEW1 402 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 TMPRSS9Q7Z410 1059 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 OR2L2Q8NH16 312 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 PSMA8Q8TAA3 256 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 EPYCQ99645 322 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 PKP2Q99959 881 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 FAM192AQ9GZU8 254 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 ABCB9Q9NP78 766 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 NLGN3Q9NZ94 848 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 DKK3Q9UBP4 350 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 KIR2DS5A0A0G2JLQ3 304 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 A0A0G2JNG1 304 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 DAPL1A0PJW8 107 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 KIR2DS3K7RE56 304 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 CCR2P41597 374 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 TMED10P49755 219 aaKnown RBP13.02□□□□□ -0.33
SCARB2-215ENST00000639145 CLDN8P56748 225 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 ZXDBP98169 803 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 PUM1Q14671 1186 aaKnown RBP eCLIP13.02□□□□□ -0.33
SCARB2-215ENST00000639145 KIR2DS5Q14953 304 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 EID2Q8N6I1 236 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 HSPBAP1Q96EW2 488 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 SORBS1Q9BX66 1292 aaKnown RBP13.02□□□□□ -0.33
SCARB2-215ENST00000639145 RAB26Q9ULW5 256 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 NUAK1O60285 661 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 HMGN1P05114 100 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 GSTT1P30711 240 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 TLR1Q15399 786 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 RNASE12Q5GAN4 147 aaKnown RBP13.02□□□□□ -0.33
SCARB2-215ENST00000639145 GPAT4Q86UL3 456 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 UBE2J2Q8N2K1 259 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 TSSK6Q9BXA6 273 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 MEAF6Q9HAF1 191 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 TAAR2Q9P1P5 351 aa13.02□□□□□ -0.33
SCARB2-215ENST00000639145 RDH16O75452 317 aa13.01□□□□□ -0.33
SCARB2-215ENST00000639145 ITGA3P26006 1051 aa13.01□□□□□ -0.33
SCARB2-215ENST00000639145 CERS1P27544 350 aa13.01□□□□□ -0.33
SCARB2-215ENST00000639145 ACSL1P33121 698 aa13.01□□□□□ -0.33
SCARB2-215ENST00000639145 ADRA1AP35348 466 aa13.01□□□□□ -0.33
SCARB2-215ENST00000639145 ZNF41P51814 821 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-215ENST00000639145 ZNF77Q15935 545 aa13.01□□□□□ -0.33
SCARB2-215ENST00000639145 VMACQ2NL98 169 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms