RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 OR6X1Q8NH79 312 aa-0.32□□□□□ -2.46
LMBR1-222ENST00000638959 CCDC26Q8TAB7 109 aa-0.32□□□□□ -2.46
LMBR1-222ENST00000638959 LIPHQ8WWY8 451 aa-0.32□□□□□ -2.46
LMBR1-222ENST00000638959 NSUN4Q96CB9 384 aaKnown RBP-0.32□□□□□ -2.46
LMBR1-222ENST00000638959 SPDL1Q96EA4 605 aa-0.32□□□□□ -2.46
LMBR1-222ENST00000638959 PIWIL1Q96J94 861 aaKnown RBP-0.32□□□□□ -2.46
LMBR1-222ENST00000638959 PCDHB18PQ96TA0 734 aa-0.32□□□□□ -2.46
LMBR1-222ENST00000638959 STACQ99469 402 aa-0.32□□□□□ -2.46
LMBR1-222ENST00000638959 SDCBP2Q9H190 292 aa-0.32□□□□□ -2.46
LMBR1-222ENST00000638959 ABT1Q9ULW3 272 aaKnown RBP-0.32□□□□□ -2.46
LMBR1-222ENST00000638959 PCM1Q15154 2024 aa-0.32□□□□□ -2.46
LMBR1-222ENST00000638959 SSPOA2VEC9 5147 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 ZNF724A8MTY0 619 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 FCGR3AP08637 254 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 KRT3P12035 628 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 CTNNA2P26232 953 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 BSGP35613 385 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 TFPI2P48307 235 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 CCR6P51684 374 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 NUP107P57740 925 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 NONOQ15233 471 aaKnown RBP eCLIP-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 FAM83EQ2M2I3 478 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 RFTN2Q52LD8 501 aaPredicted RBP-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 SBK1Q52WX2 424 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 ODF2Q5BJF6 829 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 VPS37AQ8NEZ2 397 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 OR10G2Q8NGC3 310 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 STARD8Q92502 1023 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 PROX1Q92786 737 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 SLAMF9Q96A28 289 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 MBOAT4Q96T53 435 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 CITED2Q99967 270 aaPredicted RBP-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 NICN1Q9BSH3 213 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 SPATC1LQ9H0A9 340 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 NT5DC2Q9H857 520 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 GMEB2Q9UKD1 530 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 TEX264Q9Y6I9 313 aa-0.33□□□□□ -2.46
LMBR1-222ENST00000638959 LNP1A1A4G5 178 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 CASTOR2A6NHX0 329 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 LIPT2A6NK58 231 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 NEDD8-MDP1E9PL57 170 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 IMPA2O14732 288 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 BET1O15155 118 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 LETM1O95202 739 aaPredicted RBP-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 MBD4O95243 580 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 EIF2S1P05198 315 aaKnown RBP-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 RHOXF2BP0C7M4 288 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 F3P13726 295 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 GJA1P17302 382 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 HNF1AP20823 631 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 CD1BP29016 333 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 PPP2R1AP30153 589 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 UGT1A3P35503 534 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 CTRLP40313 264 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 NRIP1P48552 1158 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 ARHGDIAP52565 204 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 RALGDSQ12967 914 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 GIT2Q14161 759 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 MED22Q15528 200 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 PDCD2Q16342 344 aaPredicted RBP-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 SNX30Q5VWJ9 437 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 KIAA0930Q6ICG6 404 aaPredicted RBP-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 SULT1C3Q6IMI6 304 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 LRRTM4Q86VH4 590 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 TMEM99Q8N816 258 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 SUMF2Q8NBJ7 301 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 CLEC1AQ8NC01 280 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 IL17REQ8NFR9 667 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 ARHGEF2Q92974 986 aaKnown RBP-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 HVCN1Q96D96 273 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 PDXPQ96GD0 296 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 DHTKD1Q96HY7 919 aaPredicted RBP-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 TMEM101Q96IK0 257 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 MS4A10Q96PG2 267 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 TTYH2Q9BSA4 534 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 PTGES2Q9H7Z7 377 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 ELL3Q9HB65 397 aaPredicted RBP-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 PLCB1Q9NQ66 1216 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 MMP26Q9NRE1 261 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 EXOC1Q9NV70 894 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 EHD2Q9NZN4 543 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 DBF4Q9UBU7 674 aaPredicted RBP-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 ZNF225Q9UK10 706 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 ZNF407Q9C0G0 2248 aa-0.34□□□□□ -2.46
LMBR1-222ENST00000638959 ACEP12821 1306 aa-0.35□□□□□ -2.46
LMBR1-222ENST00000638959 NKX2-6A6NCS4 301 aa-0.35□□□□□ -2.47
LMBR1-222ENST00000638959 RBMY1BA6NDE4 496 aaKnown RBP-0.35□□□□□ -2.47
LMBR1-222ENST00000638959 RBMY1EA6NEQ0 496 aaKnown RBP-0.35□□□□□ -2.47
LMBR1-222ENST00000638959 TRABD2BA6NFA1 517 aa-0.35□□□□□ -2.47
LMBR1-222ENST00000638959 LRRC72A6NJI9 287 aa-0.35□□□□□ -2.47
LMBR1-222ENST00000638959 ANHXE9PGG2 379 aa-0.35□□□□□ -2.47
LMBR1-222ENST00000638959 HTATSF1O43719 755 aaKnown RBP-0.35□□□□□ -2.47
LMBR1-222ENST00000638959 SPAG7O75391 227 aa-0.35□□□□□ -2.47
LMBR1-222ENST00000638959 RPS6KA5O75582 802 aa-0.35□□□□□ -2.47
LMBR1-222ENST00000638959 SUPT7LO94864 414 aa-0.35□□□□□ -2.47
LMBR1-222ENST00000638959 INSP01308 110 aa-0.35□□□□□ -2.47
LMBR1-222ENST00000638959 MYL1P05976 194 aa-0.35□□□□□ -2.47
LMBR1-222ENST00000638959 RBMY1DP0C7P1 496 aaKnown RBP-0.35□□□□□ -2.47
LMBR1-222ENST00000638959 ADRB3P13945 408 aa-0.35□□□□□ -2.47
LMBR1-222ENST00000638959 GOT1P17174 413 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms