RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 TMCO1Q9UM00 188 aa17.18■□□□□ 0.34
CLN6-214ENST00000636314 SPACA6W5XKT8 324 aa17.18■□□□□ 0.34
CLN6-214ENST00000636314 SYNDIG1LA6NDD5 238 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 SAP18O00422 153 aaKnown RBP17.17■□□□□ 0.34
CLN6-214ENST00000636314 UGDHO60701 494 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 SIX3O95343 332 aaPredicted RBP17.17■□□□□ 0.34
CLN6-214ENST00000636314 COL6A2P12110 1019 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 HIST1H1TP22492 207 aaPredicted RBP17.17■□□□□ 0.34
CLN6-214ENST00000636314 ATP5A1P25705 553 aaKnown RBP17.17■□□□□ 0.34
CLN6-214ENST00000636314 GRNP28799 593 aaKnown RBP17.17■□□□□ 0.34
CLN6-214ENST00000636314 ARL1P40616 181 aaPredicted RBP17.17■□□□□ 0.34
CLN6-214ENST00000636314 RAP1GDS1P52306 607 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 TERF2Q15554 542 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 OR1C1Q15619 314 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 AP5B1Q2VPB7 878 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 METTL2BQ6P1Q9 378 aaKnown RBP17.17■□□□□ 0.34
CLN6-214ENST00000636314 ZNF793Q6ZN11 406 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 TRMT10CQ7L0Y3 403 aaKnown RBP17.17■□□□□ 0.34
CLN6-214ENST00000636314 UBE3DQ7Z6J8 389 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 RPS19BP1Q86WX3 136 aaKnown RBP17.17■□□□□ 0.34
CLN6-214ENST00000636314 ACOT4Q8N9L9 421 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 NFAM1Q8NET5 270 aaPredicted RBP17.17■□□□□ 0.34
CLN6-214ENST00000636314 B3GNT7Q8NFL0 401 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 NR4A3Q92570 626 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 REPS1Q96D71 796 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 OR51B5Q9H339 312 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 CDCP1Q9H5V8 836 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 IPPKQ9H8X2 491 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 DMRT3Q9NQL9 472 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 PCDHGA11Q9Y5H2 935 aa17.17■□□□□ 0.34
CLN6-214ENST00000636314 AKAP9Q99996 3911 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 TGFBR3LH3BV60 316 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 CYR61O00622 381 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 SMIM24O75264 130 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 SCELO95171 688 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 CRYABP02511 175 aaKnown RBP17.16■□□□□ 0.34
CLN6-214ENST00000636314 SNRPAP09012 282 aaKnown RBP17.16■□□□□ 0.34
CLN6-214ENST00000636314 EEF1DP29692 281 aaKnown RBP17.16■□□□□ 0.34
CLN6-214ENST00000636314 PPP2R1BP30154 601 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 CD96P40200 585 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 PIK3CBP42338 1070 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 ST13P50502 369 aaKnown RBP17.16■□□□□ 0.34
CLN6-214ENST00000636314 RIPPLY3P57055 190 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 LGSNQ5TDP6 509 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 RNF175Q8N4F7 328 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 HORMAD2Q8N7B1 307 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 MDS2Q8NDY4 140 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 PHF21BQ96EK2 531 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 SIGLEC12Q96PQ1 595 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 MTERF1Q99551 399 aaKnown RBP17.16■□□□□ 0.34
CLN6-214ENST00000636314 DEFB126Q9BYW3 111 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 ADAP2Q9NPF8 381 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 SUCOQ9UBS9 1254 aaKnown RBP17.16■□□□□ 0.34
CLN6-214ENST00000636314 CLDN16Q9Y5I7 305 aa17.16■□□□□ 0.34
CLN6-214ENST00000636314 CSMD2Q7Z408 3487 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 CELSR1Q9NYQ6 3014 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 TRBV11-1A0A0K0K1C0 115 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 H0YIV9 168 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 STX16-NPEPL1H3BU86 382 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 FCHO1O14526 889 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 STX16O14662 325 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 RIPK2O43353 540 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 IFNA16P05015 189 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 CD46P15529 392 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 TPP2P29144 1249 aaPredicted RBP17.15■□□□□ 0.34
CLN6-214ENST00000636314 CLCN2P51788 898 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 STX4Q12846 297 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 ART3Q13508 389 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 CPSF6Q16630 551 aaKnown RBP eCLIP17.15■□□□□ 0.34
CLN6-214ENST00000636314 DEPDC1Q5TB30 811 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 ZNF324BQ6AW86 544 aaPredicted RBP17.15■□□□□ 0.34
CLN6-214ENST00000636314 APCDD1LQ8NCL9 501 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 RELTQ969Z4 430 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 ATP6V1E2Q96A05 226 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 RGMAQ96B86 450 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 VMP1Q96GC9 406 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 MAPKAP1Q9BPZ7 522 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 MRPL46Q9H2W6 279 aaKnown RBP17.15■□□□□ 0.34
CLN6-214ENST00000636314 KLHL1Q9NR64 748 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 KCMF1Q9P0J7 381 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 FBXW2Q9UKT8 454 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 TSC22D4Q9Y3Q8 395 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 PCDHGB6Q9Y5F9 930 aa17.15■□□□□ 0.34
CLN6-214ENST00000636314 TRGV8A0A0C4DH27 118 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 CDK2AP1O14519 115 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 CTNSO60931 367 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 SNRPB2P08579 225 aaKnown RBP17.14■□□□□ 0.33
CLN6-214ENST00000636314 CPN2P22792 545 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 TDGF1P3P51864 188 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 MLF1P58340 268 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 RPS13P62277 151 aaKnown RBP17.14■□□□□ 0.33
CLN6-214ENST00000636314 PMP22Q01453 160 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 ELAVL1Q15717 326 aaKnown RBP17.14■□□□□ 0.33
CLN6-214ENST00000636314 SPINK14Q6IE38 97 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 OR4C11Q6IEV9 310 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 GFRALQ6UXV0 394 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 L3MBTL4Q8NA19 623 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 TMEM178AQ8NBL3 297 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 DNAJB8Q8NHS0 232 aa17.14■□□□□ 0.33
CLN6-214ENST00000636314 ITLN2Q8WWU7 325 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms