RNA–Protein interactions for RNA: ENST00000635886.1

C11orf53-202, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 5

Gene C11orf53, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-202ENST00000635886 ZNF354BQ96LW1 612 aa12.57□□□□□ -0.4
C11orf53-202ENST00000635886 FRG2BQ96QU4 278 aa12.57□□□□□ -0.4
C11orf53-202ENST00000635886 ZNF717Q9BY31 904 aaPredicted RBP12.57□□□□□ -0.4
C11orf53-202ENST00000635886 RNF32Q9H0A6 362 aa12.57□□□□□ -0.4
C11orf53-202ENST00000635886 PNO1Q9NRX1 252 aaKnown RBP12.57□□□□□ -0.4
C11orf53-202ENST00000635886 ASF1BQ9NVP2 202 aa12.57□□□□□ -0.4
C11orf53-202ENST00000635886 PSD3Q9NYI0 1048 aa12.57□□□□□ -0.4
C11orf53-202ENST00000635886 PPT2Q9UMR5 302 aa12.57□□□□□ -0.4
C11orf53-202ENST00000635886 SPACA6W5XKT8 324 aa12.57□□□□□ -0.4
C11orf53-202ENST00000635886 CPAMD8Q8IZJ3 1885 aa12.57□□□□□ -0.4
C11orf53-202ENST00000635886 SHANK1Q9Y566 2161 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 MYO18BQ8IUG5 2567 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 TRAV17A0A0B4J275 112 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 MYOCOSA0A1B0GUC4 107 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 OR5H15A6NDH6 313 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 CDH16O75309 829 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 GLRA3O75311 464 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 VPS4BO75351 444 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 EEDO75530 441 aaKnown RBP12.56□□□□□ -0.4
C11orf53-202ENST00000635886 CPN2P22792 545 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 BSGP35613 385 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 UQCRFS1P47985 274 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 ST13P50502 369 aaKnown RBP12.56□□□□□ -0.4
C11orf53-202ENST00000635886 ARFIP1P53367 373 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 PRKAA2P54646 552 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 HNRNPH2P55795 449 aaKnown RBP12.56□□□□□ -0.4
C11orf53-202ENST00000635886 TAS2R50P59544 299 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 ID2Q02363 134 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 IFT88Q13099 833 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 MEP1AQ16819 746 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 SGO1Q5FBB7 561 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 WDR93Q6P2C0 686 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 SLC22A9Q8IVM8 553 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 ZCCHC7Q8N3Z6 543 aaKnown RBP12.56□□□□□ -0.4
C11orf53-202ENST00000635886 SLC5A8Q8N695 610 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 GALNT11Q8NCW6 608 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 B3GNT7Q8NFL0 401 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 SERPINI1Q99574 410 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.56□□□□□ -0.4
C11orf53-202ENST00000635886 ELOVL6Q9H5J4 265 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 ADAP2Q9NPF8 381 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 ZNF225Q9UK10 706 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 VPS4AQ9UN37 437 aa12.56□□□□□ -0.4
C11orf53-202ENST00000635886 COPG1Q9Y678 874 aaKnown RBP12.56□□□□□ -0.4
C11orf53-202ENST00000635886 A0A0A6YYD5 115 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 TLDC2A0PJX2 215 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 TCP11X1B4DZS4 312 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 G3V2L1 256 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 TMPRSS11DO60235 418 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 LDB3O75112 727 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 OR4F21O95013 312 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 SEMA3DO95025 777 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 PROCP04070 461 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 IFNA16P05015 189 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 NUDT17P0C025 328 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 IMPDH1P20839 514 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 GNLYP22749 145 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 STX4Q12846 297 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 TERF2Q15554 542 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 ERCC6LQ2NKX8 1250 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 C10orf62Q5T681 223 aaPredicted RBP12.55□□□□□ -0.4
C11orf53-202ENST00000635886 MRM1Q6IN84 353 aaKnown RBP12.55□□□□□ -0.4
C11orf53-202ENST00000635886 EMBQ6PCB8 327 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 GPR180Q86V85 440 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 RPS19BP1Q86WX3 136 aaKnown RBP12.55□□□□□ -0.4
C11orf53-202ENST00000635886 NUDT13Q86X67 352 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 APCDD1LQ8NCL9 501 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 ANKRD9Q96BM1 317 aaPredicted RBP12.55□□□□□ -0.4
C11orf53-202ENST00000635886 BARD1Q99728 777 aaKnown RBP12.55□□□□□ -0.4
C11orf53-202ENST00000635886 ALOXE3Q9BYJ1 711 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 CDCP1Q9H5V8 836 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 DDX31Q9H8H2 851 aaKnown RBP12.55□□□□□ -0.4
C11orf53-202ENST00000635886 FARSBQ9NSD9 589 aaKnown RBP12.55□□□□□ -0.4
C11orf53-202ENST00000635886 MS4A12Q9NXJ0 267 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 ANKRD10Q9NXR5 420 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 ABI3Q9P2A4 366 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 TRPS1Q9UHF7 1281 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 PHF11Q9UIL8 331 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 PPIEQ9UNP9 301 aaKnown RBP12.55□□□□□ -0.4
C11orf53-202ENST00000635886 ATG4BQ9Y4P1 393 aa12.55□□□□□ -0.4
C11orf53-202ENST00000635886 UBR5O95071 2799 aaPredicted RBP12.55□□□□□ -0.4
C11orf53-202ENST00000635886 TRBV11-1A0A0K0K1C0 115 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 BLACEA4D250 179 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 GABRR3A8MPY1 467 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 FGF17O60258 216 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 PLIN3O60664 434 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 PRKRAO75569 313 aaKnown RBP12.54□□□□□ -0.4
C11orf53-202ENST00000635886 PDYNP01213 254 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 GBAP04062 536 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 KRT4P19013 534 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 CRHR1P34998 444 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 CCT5P48643 541 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 CLCN2P51788 898 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 GPR143P51810 404 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 TNFRSF17Q02223 184 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 TUBA3CQ13748 450 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 SERTAD2Q14140 314 aa12.54□□□□□ -0.4
C11orf53-202ENST00000635886 ELAVL1Q15717 326 aaKnown RBP12.54□□□□□ -0.4
C11orf53-202ENST00000635886 TCHHL1Q5QJ38 904 aaPredicted RBP12.54□□□□□ -0.4
C11orf53-202ENST00000635886 C18orf63Q68DL7 685 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms