RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 MAPKAPK5-AS1Q8N8E1 139 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 MAB21L3Q8N8X9 362 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 MRPL43Q8N983 215 aaKnown RBP4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 DMBX1Q8NFW5 382 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 LRRC8CQ8TDW0 803 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 THOC3Q96J01 351 aaKnown RBP4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 ZNF479Q96JC4 524 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 ZNF583Q96ND8 569 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 BTBD9Q96Q07 612 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 MEIS3Q99687 375 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 ZNF559Q9BR84 538 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 RHNO1Q9BSD3 238 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 P2RY12Q9H244 342 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 DDX31Q9H8H2 851 aaKnown RBP4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 RPF1Q9H9Y2 349 aaKnown RBP4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 PELI2Q9HAT8 420 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 LRRC4Q9HBW1 653 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 PPANQ9NQ55 473 aaKnown RBP4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 FETUBQ9UGM5 382 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 TRMT6Q9UJA5 497 aaKnown RBP4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 FAF1Q9UNN5 650 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 KCNJ14Q9UNX9 436 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 ZNF510Q9Y2H8 683 aa4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 RPH3AQ9Y2J0 694 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 STRAPQ9Y3F4 350 aaKnown RBP4.57□□□□□ -1.68
TRAPPC9-216ENST00000634178 MYO15AQ9UKN7 3530 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 GREB1LQ9C091 1923 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 CACNA1HO95180 2353 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 PTPRZ1P23471 2315 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 ELP1O95163 1332 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 MAGEB16A2A368 324 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 C2CD4DB7Z1M9 353 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 TULP2O00295 520 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 ATP6V0E1O15342 81 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 ASNSP08243 561 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 LIFP15018 202 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 ARF4P18085 180 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 DGKAP23743 735 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 RPP38P78345 283 aaKnown RBP4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 ARMCX4Q5H9R4 360 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 LCN1P1Q5VSP4 162 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 KLHL10Q6JEL2 608 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 CD164L2Q6UWJ8 174 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 IL17RELQ6ZVW7 336 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 C16orf82Q7Z2V1 217 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 ADCK1Q86TW2 530 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 NFE4Q86UQ8 179 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 SERPINA12Q8IW75 414 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 BATF2Q8N1L9 274 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 TMEM99Q8N816 258 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 NEK11Q8NG66 645 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 OR13A1Q8NGR1 328 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 URGCPQ8TCY9 931 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 ULK4Q96C45 1275 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 ST6GAL2Q96JF0 529 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 LYZL4Q96KX0 146 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 C12orf42Q96LP6 360 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 ZNF560Q96MR9 790 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 NDNQ99608 321 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 CDCA3Q99618 268 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 PKP2Q99959 881 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 C1QTNF4Q9BXJ3 329 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 TFB2MQ9H5Q4 396 aaKnown RBP4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 EXOC1Q9NV70 894 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 P4HTMQ9NXG6 502 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 IL36AQ9UHA7 158 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 GRID1Q9ULK0 1009 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 FOXA2Q9Y261 457 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 VPS13AQ96RL7 3174 aa4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 KMT2BQ9UMN6 2715 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC9-216ENST00000634178 FAM186AA6NE01 2351 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 C2orf92A0A1B0GVN3 265 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 C5orf51A6NDU8 294 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 M0R296 226 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 EPHB6O15197 1021 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 TXNL1O43396 289 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 CNMDO75829 334 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 KRT33AO76009 404 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 DFFBO76075 338 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 RAF1P04049 648 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 YES1P07947 543 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 IGHV4-38-2P0DP08 117 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 LHCGRP22888 699 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 ELAVL4P26378 380 aaKnown RBP4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 NKX2-1P43699 371 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 PDLIM4P50479 330 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 CLDN17P56750 224 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 POU3F1Q03052 451 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 PDE7AQ13946 482 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 GAMTQ14353 236 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 PDK1Q15118 436 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 INAQ16352 499 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 FGD3Q5JSP0 725 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 ZNF770Q6IQ21 691 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 NEK5Q6P3R8 708 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 B3GLCTQ6Y288 498 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 THEM5Q8N1Q8 247 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 CLEC1AQ8NC01 280 aa4.55□□□□□ -1.68
TRAPPC9-216ENST00000634178 EXOC6Q8TAG9 804 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms