RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 RORCP51449 518 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 CTSCP53634 463 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 EPHB3P54753 998 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 NAGLUP54802 743 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 NAPAP54920 295 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 RAG2P55895 527 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 ITGA1P56199 1179 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 HUNKP57058 714 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 TIMM10P62072 90 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 SNRPEP62304 92 aaKnown RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 RAP1AP62834 184 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 RPS27AP62979 156 aaKnown RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 UBA52P62987 128 aaKnown RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 FOXO4P98177 505 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 TNFRSF17Q02223 184 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 SEMG2Q02383 582 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 EVX2Q03828 476 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 CHRNB3Q05901 458 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 TNFRSF9Q07011 255 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 FABP9Q0Z7S8 132 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 MAP4K2Q12851 820 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 IFRD2Q12894 506 aaPredicted RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 ELAVL2Q12926 359 aaKnown RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 PICALMQ13492 652 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 NAE1Q13564 534 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 RAB33AQ14088 237 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 BOP1Q14137 746 aaKnown RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 ARHGEF7Q14155 803 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 SCARF1Q14162 830 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 GRB14Q14449 540 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 HABP2Q14520 560 aaPredicted RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 MBTPS1Q14703 1052 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 UBXN2BQ14CS0 331 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 MAD2L1BPQ15013 274 aaPredicted RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 PEA15Q15121 130 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 RBMS2Q15434 407 aaKnown RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 SF1Q15637 639 aaKnown RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 TPSAB1Q15661 275 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 MPPED2Q15777 294 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 SNAPC1Q16533 368 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 KCNMB1Q16558 191 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 ZNF630Q2M218 657 aaPredicted RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 ALG11Q2TAA5 492 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 LGALSLQ3ZCW2 172 aaPredicted RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 CHRFAM7AQ494W8 412 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 VPS26BQ4G0F5 336 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 SYTL3Q4VX76 610 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 SLC39A12Q504Y0 691 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 AGKQ53H12 422 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 PYCR3Q53H96 274 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 ARHGAP15Q53QZ3 475 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 PYDC2Q56P42 97 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 SGO1Q5FBB7 561 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 ARSIQ5FYB1 569 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 XKR4Q5GH76 650 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 MANEAQ5SRI9 462 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 ODR4Q5SWX8 454 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 C9orf64Q5T6V5 341 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 SH3PXD2AQ5TCZ1 1133 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 ARHGAP40Q5TG30 622 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 PRPF38BQ5VTL8 546 aaKnown RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 HIST2H2AA3Q6FI13 130 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 ABLIM2Q6H8Q1 611 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 PPP1R18Q6NYC8 613 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 CDC73Q6P1J9 531 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 DENND1BQ6P3S1 775 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 MZT2AQ6P582 158 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 FAM199XQ6PEV8 388 aaPredicted RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 DEGS2Q6QHC5 323 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 TBPL2Q6SJ96 375 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 SPESP1Q6UW49 350 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 SCIMPQ6UWF3 145 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 MFSD7Q6UXD7 560 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 CASP12Q6UXS9 341 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 BAIAP2L2Q6UXY1 529 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 ZNF783Q6ZMS7 281 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 TMEM179Q6ZVK1 233 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 AHSA2Q719I0 299 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 ZNF720Q7Z2F6 126 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 SMIM15Q7Z3B0 74 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 PIWIL4Q7Z3Z4 852 aaKnown RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 CLEC14AQ86T13 490 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 TSPAN33Q86UF1 283 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 LRRTM4Q86VH4 590 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 IQCHQ86VS3 1027 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 TPRA1Q86W33 373 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 IFNEQ86WN2 208 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 ANGPTL5Q86XS5 388 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 LDLRAD3Q86YD5 345 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 PHF13Q86YI8 300 aaPredicted RBP1.84□□□□□ -2.11
TCF4-264ENST00000628391 CBLN2Q8IUK8 224 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 FUNDC1Q8IVP5 155 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 MISPQ8IVT2 679 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 IGDCC3Q8IVU1 814 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 GID4Q8IVV7 300 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 ADHFE1Q8IWW8 467 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 FAM178BQ8IXR5 827 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 NIM1KQ8IY84 436 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 C7orf61Q8IZ16 206 aa1.84□□□□□ -2.11
TCF4-264ENST00000628391 PUSL1Q8N0Z8 303 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms