RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 PCNPQ8WW12 178 aaKnown RBP2.55□□□□□ -2
VBP1-204ENST00000625964 ITLN1Q8WWA0 313 aa2.55□□□□□ -2
VBP1-204ENST00000625964 MR1Q95460 341 aa2.55□□□□□ -2
VBP1-204ENST00000625964 SPATA17Q96L03 361 aa2.55□□□□□ -2
VBP1-204ENST00000625964 CCDC114Q96M63 670 aa2.55□□□□□ -2
VBP1-204ENST00000625964 ZMAT2Q96NC0 199 aaKnown RBP2.55□□□□□ -2
VBP1-204ENST00000625964 C17orf62Q9BQA9 187 aa2.55□□□□□ -2
VBP1-204ENST00000625964 CCM2Q9BSQ5 444 aa2.55□□□□□ -2
VBP1-204ENST00000625964 IDI2Q9BXS1 227 aa2.55□□□□□ -2
VBP1-204ENST00000625964 CUEDC2Q9H467 287 aa2.55□□□□□ -2
VBP1-204ENST00000625964 VIPAS39Q9H9C1 493 aa2.55□□□□□ -2
VBP1-204ENST00000625964 GPR173Q9NS66 373 aa2.55□□□□□ -2
VBP1-204ENST00000625964 MED17Q9NVC6 651 aa2.55□□□□□ -2
VBP1-204ENST00000625964 SLCO1C1Q9NYB5 712 aa2.55□□□□□ -2
VBP1-204ENST00000625964 ZNF319Q9P2F9 582 aa2.55□□□□□ -2
VBP1-204ENST00000625964 ARMCX3Q9UH62 379 aaPredicted RBP2.55□□□□□ -2
VBP1-204ENST00000625964 ETV7Q9Y603 341 aa2.55□□□□□ -2
VBP1-204ENST00000625964 CPQQ9Y646 472 aa2.55□□□□□ -2
VBP1-204ENST00000625964 ERCC6Q03468 1493 aa2.54□□□□□ -2
VBP1-204ENST00000625964 TEX48A0A1B0GUV7 120 aa2.54□□□□□ -2
VBP1-204ENST00000625964 SLC30A4O14863 429 aa2.54□□□□□ -2
VBP1-204ENST00000625964 SLU7O95391 586 aaKnown RBP2.54□□□□□ -2
VBP1-204ENST00000625964 IGHG1P01857 330 aa2.54□□□□□ -2
VBP1-204ENST00000625964 FAM200BP0CF97 657 aa2.54□□□□□ -2
VBP1-204ENST00000625964 GJB2P29033 226 aa2.54□□□□□ -2
VBP1-204ENST00000625964 ELK3P41970 407 aa2.54□□□□□ -2
VBP1-204ENST00000625964 SLC1A6P48664 564 aa2.54□□□□□ -2
VBP1-204ENST00000625964 SLC3A1Q07837 685 aa2.54□□□□□ -2
VBP1-204ENST00000625964 CYLC2Q14093 348 aaPredicted RBP2.54□□□□□ -2
VBP1-204ENST00000625964 PODNL1Q6PEZ8 512 aa2.54□□□□□ -2
VBP1-204ENST00000625964 SIGLEC15Q6ZMC9 328 aa2.54□□□□□ -2
VBP1-204ENST00000625964 ZNF730Q6ZMV8 503 aa2.54□□□□□ -2
VBP1-204ENST00000625964 NUFIP2Q7Z417 695 aaKnown RBP2.54□□□□□ -2
VBP1-204ENST00000625964 GLRX5Q86SX6 157 aa2.54□□□□□ -2
VBP1-204ENST00000625964 CD177Q8N6Q3 437 aa2.54□□□□□ -2
VBP1-204ENST00000625964 C8orf46Q8TAG6 207 aa2.54□□□□□ -2
VBP1-204ENST00000625964 AFAP1L1Q8TED9 768 aa2.54□□□□□ -2
VBP1-204ENST00000625964 PARK7Q99497 189 aaKnown RBP2.54□□□□□ -2
VBP1-204ENST00000625964 ZNF665Q9H7R5 613 aa2.54□□□□□ -2
VBP1-204ENST00000625964 ZCCHC17Q9NP64 241 aaKnown RBP2.54□□□□□ -2
VBP1-204ENST00000625964 SPATA2Q9UM82 520 aa2.54□□□□□ -2
VBP1-204ENST00000625964 VSIG4Q9Y279 399 aa2.54□□□□□ -2
VBP1-204ENST00000625964 UNC13AQ9UPW8 1703 aa2.53□□□□□ -2
VBP1-204ENST00000625964 OR5H15A6NDH6 313 aa2.53□□□□□ -2
VBP1-204ENST00000625964 M0R296 226 aa2.53□□□□□ -2
VBP1-204ENST00000625964 SEMA4FO95754 770 aa2.53□□□□□ -2
VBP1-204ENST00000625964 HCKP08631 526 aa2.53□□□□□ -2
VBP1-204ENST00000625964 SUPT20HL2P0C7V6 817 aa2.53□□□□□ -2
VBP1-204ENST00000625964 SKILP12757 684 aa2.53□□□□□ -2
VBP1-204ENST00000625964 EZRP15311 586 aaKnown RBP2.53□□□□□ -2
VBP1-204ENST00000625964 RBP5P82980 135 aa2.53□□□□□ -2
VBP1-204ENST00000625964 RUNX3Q13761 415 aa2.53□□□□□ -2
VBP1-204ENST00000625964 ACKR1Q16570 336 aa2.53□□□□□ -2
VBP1-204ENST00000625964 RNF212Q495C1 297 aa2.53□□□□□ -2
VBP1-204ENST00000625964 NHLRC3Q5JS37 347 aa2.53□□□□□ -2
VBP1-204ENST00000625964 ALKBH5Q6P6C2 394 aaKnown RBP2.53□□□□□ -2
VBP1-204ENST00000625964 MSANTD1Q6ZTZ1 278 aa2.53□□□□□ -2
VBP1-204ENST00000625964 HIPK1Q86Z02 1210 aa2.53□□□□□ -2
VBP1-204ENST00000625964 AQP12AQ8IXF9 295 aa2.53□□□□□ -2
VBP1-204ENST00000625964 ZBED8Q8IZ13 594 aa2.53□□□□□ -2
VBP1-204ENST00000625964 ZNF444Q8N0Y2 327 aaPredicted RBP2.53□□□□□ -2
VBP1-204ENST00000625964 NME8Q8N427 588 aa2.53□□□□□ -2
VBP1-204ENST00000625964 RASL10BQ96S79 203 aa2.53□□□□□ -2
VBP1-204ENST00000625964 SRD5A3Q9H8P0 318 aa2.53□□□□□ -2
VBP1-204ENST00000625964 MRPL17Q9NRX2 175 aaKnown RBP2.53□□□□□ -2
VBP1-204ENST00000625964 CLEC5AQ9NY25 188 aa2.53□□□□□ -2
VBP1-204ENST00000625964 ABCD2Q9UBJ2 740 aa2.53□□□□□ -2
VBP1-204ENST00000625964 MRPL11Q9Y3B7 192 aaKnown RBP2.53□□□□□ -2
VBP1-204ENST00000625964 FBXO7Q9Y3I1 522 aa2.53□□□□□ -2
VBP1-204ENST00000625964 BCLAF3A2AJT9 711 aaKnown RBP2.52□□□□□ -2.01
VBP1-204ENST00000625964 KLLNB2CW77 178 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 NEDD8-MDP1E9PL57 170 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 RAD51DO75771 328 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 VENTXO95231 258 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 THY1P04216 161 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 ANPEPP15144 967 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 PPP2R1AP30153 589 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 ID1P41134 155 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 FHITP49789 147 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 ADARP55265 1226 aaKnown RBP2.52□□□□□ -2.01
VBP1-204ENST00000625964 BFSP1Q12934 665 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 NHSL2Q5HYW2 709 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 ATAD3CQ5T2N8 411 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 BAIAP2L2Q6UXY1 529 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 GALNTL5Q7Z4T8 443 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 CACUL1Q86Y37 369 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 ATAD1Q8NBU5 361 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 ERGIC2Q96RQ1 377 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 HSD17B14Q9BPX1 270 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 APOL2Q9BQE5 337 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 TUFT1Q9NNX1 390 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 TMEM161AQ9NX61 479 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 SEPT10Q9P0V9 454 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 VPS18Q9P253 973 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 CDH7Q9ULB5 785 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 COL4A4P53420 1690 aaPredicted RBP2.52□□□□□ -2.01
VBP1-204ENST00000625964 OOEPA6NGQ2 149 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 SRRM4A7MD48 611 aaKnown RBP2.52□□□□□ -2.01
VBP1-204ENST00000625964 ZNF724A8MTY0 619 aa2.52□□□□□ -2.01
VBP1-204ENST00000625964 FRAT2O75474 233 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms