RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 RHBGQ9H310 441 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 LHX9Q9NQ69 397 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 SERGEFQ9UGK8 458 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 ICKQ9UPZ9 632 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 ANGPT4Q9Y264 503 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 RWDD3Q9Y3V2 267 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 FAM32AQ9Y421 112 aaKnown RBP11.4□□□□□ -0.58
TP53-227ENST00000622645 PLXND1Q9Y4D7 1925 aa11.4□□□□□ -0.58
TP53-227ENST00000622645 A0A1W2PPV9 198 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 FAM227AF5H4B4 570 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 IFNA14P01570 189 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 FUCA1P04066 466 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 BCHEP06276 602 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 CA3P07451 260 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 ERGP11308 486 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 CD36P16671 472 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 PUM1Q14671 1186 aaKnown RBP eCLIP11.4□□□□□ -0.59
TP53-227ENST00000622645 TMEM236Q5W0B7 351 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 DCDC5Q6ZRR9 648 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 TMCO5AQ8N6Q1 288 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 AMER3Q8N944 861 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 LINC01555Q8NAE3 123 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 PHOSPHO2Q8TCD6 241 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 HERVK_113Q902F9 699 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 EXOSC8Q96B26 276 aaKnown RBP11.4□□□□□ -0.59
TP53-227ENST00000622645 ARMC7Q9H6L4 198 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 NECTIN3Q9NQS3 549 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 POFUT2Q9Y2G5 429 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 PMF1-BGLAPU3KQ54 211 aa11.4□□□□□ -0.59
TP53-227ENST00000622645 TRPM6Q9BX84 2022 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 DNAH14Q0VDD8 3507 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 DOCK9Q9BZ29 2069 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 WASHC1A8K0Z3 465 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 OR1F1O43749 312 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 TMPRSS11DO60235 418 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 LCMT2O60294 686 aaKnown RBP11.39□□□□□ -0.59
TP53-227ENST00000622645 B4GALT2O60909 372 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 GADD45GO95257 159 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 NADKO95544 446 aaPredicted RBP11.39□□□□□ -0.59
TP53-227ENST00000622645 PAK4O96013 591 aaPredicted RBP11.39□□□□□ -0.59
TP53-227ENST00000622645 STATHP02808 62 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 SERPIND1P05546 499 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 GJA4P35212 333 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 LIPAP38571 399 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 CCR8P51685 355 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 ELOAQ14241 798 aaKnown RBP11.39□□□□□ -0.59
TP53-227ENST00000622645 PDGFRLQ15198 375 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 REEP3Q6NUK4 255 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 WASH2PQ6VEQ5 465 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 ADCK2Q7Z695 626 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 FAM20CQ8IXL6 584 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 GGHQ92820 318 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 RAB7BQ96AH8 199 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 LGALS12Q96DT0 336 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 CHFRQ96EP1 664 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 OSGEPL1Q9H4B0 414 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 XKR8Q9H6D3 395 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 TEX10Q9NXF1 929 aaPredicted RBP11.39□□□□□ -0.59
TP53-227ENST00000622645 GPR83Q9NYM4 423 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 ZNF226Q9NYT6 803 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 THAP10Q9P2Z0 257 aaPredicted RBP11.39□□□□□ -0.59
TP53-227ENST00000622645 PSORS1C1Q9UIG5 152 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 ENPP4Q9Y6X5 453 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 MUC22E2RYF6 1773 aaPredicted RBP11.39□□□□□ -0.59
TP53-227ENST00000622645 CLDN25C9JDP6 229 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 CAPN5O15484 640 aaPredicted RBP11.39□□□□□ -0.59
TP53-227ENST00000622645 KAT7O95251 611 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 SLC35G4P0C7Q5 338 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 ACP5P13686 325 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 ZNF12P17014 697 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 TGFBR2P37173 567 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 GPM6BQ13491 265 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 HEPACAMQ14CZ8 416 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 AGBL4Q5VU57 503 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 SNX29P2Q8IUI4 249 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 CENPSQ8N2Z9 138 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 DNAJC22Q8N4W6 341 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 PHF10Q8WUB8 498 aaKnown RBP11.39□□□□□ -0.59
TP53-227ENST00000622645 SMPDL3AQ92484 453 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 PDXPQ96GD0 296 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 ZNF556Q9HAH1 456 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 WASH6PQ9NQA3 447 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 SPATA7Q9P0W8 599 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 HCN4Q9Y3Q4 1203 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 SZT2Q5T011 3432 aa11.39□□□□□ -0.59
TP53-227ENST00000622645 PRR23AA6NEV1 266 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 CLCA1A8K7I4 914 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 BOLA2-SMG1P6H3BVE0 249 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 FFAR1O14842 300 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 PDPK1O15530 556 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 SH3BP5O60239 455 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 SEMA3DO95025 777 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 GASTP01350 101 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 IFNW1P05000 195 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 POU2F2P09086 479 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 FCARP24071 287 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 LIMS1P48059 325 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 PXNP49023 591 aaPredicted RBP11.38□□□□□ -0.59
TP53-227ENST00000622645 LIM2P55344 173 aa11.38□□□□□ -0.59
TP53-227ENST00000622645 CSNK2BP67870 215 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms