RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PRTFDC1Q9NRG1 225 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 LHX6Q9UPM6 363 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 ATG4BQ9Y4P1 393 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 KCNMB2Q9Y691 235 aa17.48■□□□□ 0.39
CIRBP-245ENST00000621399 RGS14O43566 566 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 LINC00032P0C843 101 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 MAOAP21397 527 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 TPP2P29144 1249 aaPredicted RBP17.47■□□□□ 0.39
CIRBP-245ENST00000621399 TLX1P31314 330 aaPredicted RBP17.47■□□□□ 0.39
CIRBP-245ENST00000621399 HNRNPFP52597 415 aaKnown RBP17.47■□□□□ 0.39
CIRBP-245ENST00000621399 MAPK12P53778 367 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 RRADP55042 308 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 HNRNPH2P55795 449 aaKnown RBP17.47■□□□□ 0.39
CIRBP-245ENST00000621399 HSD17B7P56937 341 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 RHDQ02161 417 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 EEF1A2Q05639 463 aaKnown RBP17.47■□□□□ 0.39
CIRBP-245ENST00000621399 ACSM2AQ08AH3 577 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 SLC13A2Q13183 592 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 UGT3A2Q3SY77 523 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 SPIN4Q56A73 249 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 ATG16L1Q676U5 607 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 ACSM2BQ68CK6 577 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 MRM1Q6IN84 353 aaKnown RBP17.47■□□□□ 0.39
CIRBP-245ENST00000621399 QSOX2Q6ZRP7 698 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 TMEM102Q8N9M5 508 aaPredicted RBP17.47■□□□□ 0.39
CIRBP-245ENST00000621399 TMEM52Q8NDY8 209 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 OR11G2Q8NGC1 345 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 RAB3IL1Q8TBN0 382 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 TWIST2Q8WVJ9 160 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 TSLPQ969D9 159 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 APIPQ96GX9 242 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 C20orf27Q9GZN8 174 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 TUBB1Q9H4B7 451 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 MANSC1Q9H8J5 431 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 C19orf25Q9UFG5 118 aaPredicted RBP17.47■□□□□ 0.39
CIRBP-245ENST00000621399 FBXL4Q9UKA2 621 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.47■□□□□ 0.39
CIRBP-245ENST00000621399 RAP2CQ9Y3L5 183 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 MMACHCQ9Y4U1 282 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 ASB4Q9Y574 426 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 PTGDR2Q9Y5Y4 395 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 MGAQ8IWI9 3026 aa17.47■□□□□ 0.39
CIRBP-245ENST00000621399 BLACEA4D250 179 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 PIP5K1BO14986 540 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 PROM1O43490 865 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 ATP8B1O43520 1251 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 RSL1D1O76021 490 aaKnown RBP17.46■□□□□ 0.39
CIRBP-245ENST00000621399 BUD31P41223 144 aaPredicted RBP17.46■□□□□ 0.39
CIRBP-245ENST00000621399 CHAF1BQ13112 559 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 HSP90B2PQ58FF3 399 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 DCAF10Q5QP82 559 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 RNF165Q6ZSG1 346 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 LANCL3Q6ZV70 420 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 ANKRD37Q7Z713 158 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 ZNF781Q8N8C0 355 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 SORT1Q99523 831 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 ARHGAP9Q9BRR9 750 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 ING2Q9H160 280 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 NECTIN3Q9NQS3 549 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 THAP1Q9NVV9 213 aa17.46■□□□□ 0.39
CIRBP-245ENST00000621399 LOC102723996A0A087X1L8 192 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 NSG1A0A0A6YYJ2 146 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 IGHV3-20A0A0C4DH32 117 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 A0A1W2PR48 441 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 PCDH7O60245 1069 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 CTNSO60931 367 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 GUCY1B2O75343 617 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 RPL14P50914 215 aaKnown RBP17.45■□□□□ 0.38
CIRBP-245ENST00000621399 TNFRSF17Q02223 184 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 ACTN3Q08043 901 aaPredicted RBP17.45■□□□□ 0.38
CIRBP-245ENST00000621399 CPZQ66K79 652 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 C18orf63Q68DL7 685 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 NDUFAF7Q7L592 441 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 CPEB2Q7Z5Q1 589 aaKnown RBP17.45■□□□□ 0.38
CIRBP-245ENST00000621399 CLNKQ7Z7G1 428 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 APLFQ8IW19 511 aaPredicted RBP17.45■□□□□ 0.38
CIRBP-245ENST00000621399 SCUBE1Q8IWY4 988 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 CLEC1AQ8NC01 280 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 DYDC1Q8WWB3 177 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 RPF2Q9H7B2 306 aaKnown RBP17.45■□□□□ 0.38
CIRBP-245ENST00000621399 WDR41Q9HAD4 459 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 ZNF160Q9HCG1 818 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 PFDN4Q9NQP4 134 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 MCM8Q9UJA3 840 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 CCL27Q9Y4X3 112 aa17.45■□□□□ 0.38
CIRBP-245ENST00000621399 IGKV3D-11A0A0A0MRZ8 115 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 IGHV1-45A0A0A0MS14 117 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 GNG14A0A1W2PPG7 69 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 MASP2O00187 686 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 SEC22BO75396 215 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 SKAP2O75563 359 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-245ENST00000621399 MYO1DO94832 1006 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 HPP00738 406 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 NR2F6P10588 404 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 COX6A1P12074 109 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 NR1D1P20393 614 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 CCL11P51671 97 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 OR4D2P58180 307 aa17.44■□□□□ 0.38
CIRBP-245ENST00000621399 RAE1P78406 368 aaKnown RBP17.44■□□□□ 0.38
CIRBP-245ENST00000621399 STX4Q12846 297 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms