RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ALDH18A1P54886 795 aaKnown RBP15.99■□□□□ 0.15
HMGN3-203ENST00000620514 RCN2Q14257 317 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 ELAVL1Q15717 326 aaKnown RBP15.99■□□□□ 0.15
HMGN3-203ENST00000620514 AP5B1Q2VPB7 878 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 TMEM35AQ53FP2 167 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 TECRLQ5HYJ1 363 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 RNFT1Q5M7Z0 435 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 DEPDC1Q5TB30 811 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 KHDRBS2Q5VWX1 349 aaKnown RBP15.99■□□□□ 0.15
HMGN3-203ENST00000620514 SIAH3Q8IW03 269 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 CPSF7Q8N684 471 aaKnown RBP15.99■□□□□ 0.15
HMGN3-203ENST00000620514 SRFBP1Q8NEF9 429 aaKnown RBP15.99■□□□□ 0.15
HMGN3-203ENST00000620514 HUS1BQ8NHY5 278 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 UHMK1Q8TAS1 419 aaKnown RBP15.99■□□□□ 0.15
HMGN3-203ENST00000620514 PTPMT1Q8WUK0 201 aaPredicted RBP15.99■□□□□ 0.15
HMGN3-203ENST00000620514 SLC44A1Q8WWI5 657 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 CMTM7Q96FZ5 175 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 GPR137Q96N19 417 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 FMO2Q99518 471 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 ALOXE3Q9BYJ1 711 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 MYO7BQ6PIF6 2116 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 CCDC189A1A4V9 331 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 TMEM200CA6NKL6 621 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 CDK2AP1O14519 115 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 ZNHIT1O43257 154 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 ITGA10O75578 1167 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 SCELO95171 688 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 SERPINB1P30740 379 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 CA7P43166 264 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 STX4Q12846 297 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 GTF2H2Q13888 395 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 PCBP2Q15366 365 aaKnown RBP eCLIP15.98■□□□□ 0.15
HMGN3-203ENST00000620514 GTF2H2CQ6P1K8 395 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 CEP128Q6ZU80 1094 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 CHSY3Q70JA7 882 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 GOLGA7Q7Z5G4 137 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 TMEM132CQ8N3T6 1108 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 ZNF321PQ8N8H1 164 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 FAM98AQ8NCA5 519 aaKnown RBP15.98■□□□□ 0.15
HMGN3-203ENST00000620514 ANKRD9Q96BM1 317 aaPredicted RBP15.98■□□□□ 0.15
HMGN3-203ENST00000620514 PAFAH2Q99487 392 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 MTERF1Q99551 399 aaKnown RBP15.98■□□□□ 0.15
HMGN3-203ENST00000620514 ACTR8Q9H981 624 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 DMRT3Q9NQL9 472 aa15.98■□□□□ 0.15
HMGN3-203ENST00000620514 CCL21O00585 134 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 SLC19A2O60779 497 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 ZFAND5O76080 213 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 INHBAP08476 426 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 CTAGE8P0CG41 777 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 CPN2P22792 545 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 MAGEA12P43365 314 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 RPS13P62277 151 aaKnown RBP15.97■□□□□ 0.15
HMGN3-203ENST00000620514 HSF1Q00613 529 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 RBPJQ06330 500 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 SLAMF1Q13291 335 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 C3AR1Q16581 482 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 LIPJQ5W064 366 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 OR4C11Q6IEV9 310 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 KLC3Q6P597 504 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 MDGA2Q7Z553 956 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 CTAGE4Q8IX94 777 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 OR4N5Q8IXE1 308 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 TMEM156Q8N614 296 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 PTGR2Q8N8N7 351 aaPredicted RBP15.97■□□□□ 0.15
HMGN3-203ENST00000620514 MNS1Q8NEH6 495 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 ISL2Q96A47 359 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 CCDC120Q96HB5 630 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 CCDC77Q9BR77 488 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 IPPKQ9H8X2 491 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 VTI1BQ9UEU0 232 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 RNF11Q9Y3C5 154 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 CLCA3PQ9Y6N3 262 aa15.97■□□□□ 0.15
HMGN3-203ENST00000620514 C17orf105B2RV13 164 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 POC1B-GALNT4F8VUJ3 575 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 PLPP1O14494 284 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 FGF17O60258 216 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 PRKRAO75569 313 aaKnown RBP15.96■□□□□ 0.15
HMGN3-203ENST00000620514 TNNI3P19429 210 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 RFC3P40938 356 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 PIK3CBP42338 1070 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 PIK3CGP48736 1102 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 MEOX1P50221 254 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 RAP1GDS1P52306 607 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 CPSF6Q16630 551 aaKnown RBP eCLIP15.96■□□□□ 0.15
HMGN3-203ENST00000620514 KRTCAP3Q53RY4 240 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 SULF2Q8IWU5 870 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 CYP4Z2PQ8N1L4 340 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 ITLN2Q8WWU7 325 aaPredicted RBP15.96■□□□□ 0.15
HMGN3-203ENST00000620514 DAZLQ92904 295 aaKnown RBP15.96■□□□□ 0.15
HMGN3-203ENST00000620514 TMEM125Q96AQ2 219 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 RGMAQ96B86 450 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 OR8D2Q9GZM6 311 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 ADGRE2Q9UHX3 823 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 TINAGQ9UJW2 476 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 ZNF835Q9Y2P0 537 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 TSC22D4Q9Y3Q8 395 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 PCDHGA11Q9Y5H2 935 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 SPACA6W5XKT8 324 aa15.96■□□□□ 0.15
HMGN3-203ENST00000620514 NOTCH2Q04721 2471 aa15.95■□□□□ 0.14
HMGN3-203ENST00000620514 H0YIV9 168 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms