RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 CHRNB3Q05901 458 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 RGS1Q08116 209 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 SIM2Q14190 667 aaPredicted RBP12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 MAP7Q14244 749 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 FAM98BQ52LJ0 330 aaKnown RBP12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 FBXO42Q6P3S6 717 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 SERPINA11Q86U17 422 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 OFCC1Q8IZS5 231 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 TRIML2Q8N7C3 387 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 ACOT4Q8N9L9 421 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 FAM47BQ8NA70 645 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 ZFP90Q8TF47 636 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 CYGBQ8WWM9 190 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 TFAP2CQ92754 450 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 TMBIM1Q969X1 311 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 SLC47A1Q96FL8 570 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 TAS2R9Q9NYW1 312 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 KLK4Q9Y5K2 254 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 MDC1Q14676 2089 aaKnown RBP12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 SPAG17Q6Q759 2223 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 EML5Q05BV3 1969 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 OR5K3A6NET4 321 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 H0YJX3 145 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 AQP9O43315 295 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 TNFSF14O43557 240 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 SCELO95171 688 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 SNAP29O95721 258 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 ZNF888P0CJ79 500 aaPredicted RBP12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 GPX2P18283 190 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 ATP5A1P25705 553 aaKnown RBP12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 CRATP43155 626 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 FNTBP49356 437 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 HNRNPKP61978 463 aaKnown RBP eCLIP12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 BTN3A2P78410 334 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 TXNL4AP83876 142 aaKnown RBP12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 HSPB3Q12988 150 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 ZIK1Q3SY52 487 aaPredicted RBP12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 LRRC23Q53EV4 343 aaPredicted RBP12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 TMTC4Q5T4D3 741 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 FRMPD2BQ6IN97 320 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 NATD1Q8N6N6 113 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 ADI1Q9BV57 179 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 UCK1Q9HA47 277 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 PRDM7Q9NQW5 492 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 RAPGEFL1Q9UHV5 662 aa12.06□□□□□ -0.48
TNFAIP3-209ENST00000619035 SDK1Q7Z5N4 2213 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 LOC105369274A0A096LPK9 316 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 LOC102723532A0A0G2JNH3 316 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 A0A0J9YY10 115 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 WASHC1A8K0Z3 465 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 BCAT2O15382 392 aaPredicted RBP12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 P2RX6O15547 441 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 KCNK5O95279 499 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 NUDT7P0C024 238 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 TSFMP43897 325 aaKnown RBP12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 AFF3P51826 1226 aaKnown RBP12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 MANFP55145 182 aaKnown RBP12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 MERTKQ12866 999 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 SLC5A12Q1EHB4 618 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 LIN52Q52LA3 116 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 KRT80Q6KB66 452 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 OR4N4Q8N0Y3 316 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 ARL14Q8N4G2 192 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 SRFBP1Q8NEF9 429 aaKnown RBP12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 PHF12Q96QT6 1004 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 OR2A5Q96R48 311 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 ZFYVE21Q9BQ24 234 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 FAIM2Q9BWQ8 316 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 SLAMF7Q9NQ25 335 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 UCKL1Q9NWZ5 548 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 SNX11Q9Y5W9 270 aa12.05□□□□□ -0.48
TNFAIP3-209ENST00000619035 SH3BP5O60239 455 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 TNFAIP8O95379 198 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 TFAP2AP05549 437 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 PPIBP23284 216 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 PEX19P40855 299 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 TRA2BP62995 288 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 SNRPNP63162 240 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 TGM3Q08188 693 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 RGNQ15493 299 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 VMACQ2NL98 169 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 COX20Q5RI15 118 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 CWF19L1Q69YN2 538 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 ZZZ3Q8IYH5 903 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 METTL25Q8N6Q8 603 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 GOT1L1Q8NHS2 421 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 BAHD1Q8TBE0 780 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 MAL2Q969L2 176 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 RERGQ96A58 199 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 THAP11Q96EK4 314 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 TRAPPC9Q96Q05 1148 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 BDH2Q9BUT1 245 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 GRIP2Q9C0E4 1043 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 ERVMER34-1Q9H9K5 563 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 IL21RQ9HBE5 538 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 PRMT8Q9NR22 394 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 DCAF13Q9NV06 445 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 OLAHQ9NV23 265 aa12.04□□□□□ -0.48
TNFAIP3-209ENST00000619035 CORO2BQ9UQ03 480 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms