RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ALG5Q9Y673 324 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 SESN1Q9Y6P5 492 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 SHROOM3Q8TF72 1996 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 NRXN2Q9P2S2 1712 aa3.9□□□□□ -1.79
HMGB1P50-201ENST00000605814 ALPK3Q96L96 1907 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 NUP205Q92621 2012 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TRAV6A0A075B6T7 132 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TRBV5-3A0A0A0MS03 114 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 CIB4A0PJX0 185 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 ELOVL7A1L3X0 281 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 FABP12A6NFH5 140 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM220BPB1ANY3 271 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 INMT-MINDY4F8WBC2 141 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 QSOX1O00391 747 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 BTN3A3O00478 584 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 FABP7O15540 132 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 CHMP2AO43633 222 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 KLK8O60259 260 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 PCDHGA12O60330 932 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 MPZL2O60487 215 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 SELENOFO60613 162 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 SCN2BO60939 215 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 PEX14O75381 377 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 CREG1O75629 220 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 KLHL18O94889 574 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 FADS2O95864 444 aaKnown RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 C1RP00736 705 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 DNTTP04053 509 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 SEMG1P04279 462 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 SCG5P05408 212 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 CKMP06732 381 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 CLEC2LP0C7M8 214 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 SRCP12931 536 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 HGFP14210 728 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 LHCGRP22888 699 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 RPS3P23396 243 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 PSMB4P28070 264 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 HOXA6P31267 233 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 HOXA13P31271 388 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 GGT2P36268 569 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 ARL2P36404 184 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TGFBR1P36897 503 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 GSTM5P46439 218 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 KCNJ5P48544 419 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 HSPA7P48741 367 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 GMPSP49915 693 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 SUOXP51687 545 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 PSMD4P55036 377 aaKnown RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 RRADP55042 308 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 GFRA1P56159 465 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 CRADDP78560 199 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 RELQ04864 619 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 KRTAP1-1Q07627 177 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 PUDPQ08623 228 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 CAMK2DQ13557 499 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 DGCR6Q14129 220 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 PGM5Q15124 567 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM214AQ32MH5 1076 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TKFCQ3LXA3 575 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TTLL9Q3SXZ7 439 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 LGALSLQ3ZCW2 172 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM76BQ5HYJ3 339 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 C3orf38Q5JPI3 329 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 CELF3Q5SZQ8 465 aaKnown RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 C10orf62Q5T681 223 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM102AQ5T9C2 384 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 MEDAGQ5VYS4 303 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 ARHGAP17Q68EM7 881 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 KIAA0930Q6ICG6 404 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 ANKRD54Q6NXT1 300 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC27A4Q6P1M0 643 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 SPESP1Q6UW49 350 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 RTL4Q6ZR62 310 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 PGAP1Q75T13 922 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 EIF3MQ7L2H7 374 aaKnown RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 PID1Q7Z2X4 250 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 BNIPLQ7Z465 357 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 IFNEQ86WN2 208 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 NT5DC4Q86YG4 428 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC41A1Q8IVJ1 513 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 CEP97Q8IW35 865 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 MFSD6LQ8IWD5 586 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 PHC2Q8IXK0 858 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 ENTHD1Q8IYW4 607 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 ADGRF3Q8IZF5 1079 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 RNF113BQ8IZP6 322 aaKnown RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 ARL6IP6Q8N6S5 226 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 LRRC17Q8N6Y2 441 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM169BQ8N8A8 192 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 DCBLD1Q8N8Z6 715 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TMEM145Q8NBT3 493 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 SRFBP1Q8NEF9 429 aaKnown RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TMIEQ8NEW7 156 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 DMBX1Q8NFW5 382 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR2T12Q8NG77 320 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR4A15Q8NGL6 344 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR2T11Q8NH01 316 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR52N1Q8NH53 320 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 PROKR1Q8TCW9 393 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TWIST2Q8WVJ9 160 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms