RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 TNFRSF1AP19438 455 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 COMTP21964 271 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 KLRK1P26718 216 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ELK4P28324 431 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 PBX3P40426 434 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 GATA4P43694 442 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 GYG1P46976 350 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 RAB4BP61018 213 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 VAMP2P63027 116 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 TRAF3Q13114 568 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 SNTB2Q13425 540 aaKnown RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 MESDQ14696 234 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 RFX4Q33E94 735 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ZNF404Q494X3 552 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 FAM98BQ52LJ0 330 aaKnown RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 C2CD6Q53TS8 623 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 TPRG1LQ5T0D9 272 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ZC3HC1Q86WB0 502 aaKnown RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 PGAM4Q8N0Y7 254 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 GUF1Q8N442 669 aaKnown RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 PARP16Q8N5Y8 322 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 RTL3Q8N8U3 475 aaKnown RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 RNASE11Q8TAA1 199 aaKnown RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 SFT2D1Q8WV19 159 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 PCNPQ8WW12 178 aaKnown RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ADAMTS14Q8WXS8 1223 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 PHYHIPQ92561 330 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 NSMAFQ92636 917 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 CSPG4P5Q96PW8 444 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ACBD6Q9BR61 282 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 FAM83DQ9H4H8 585 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ZNF768Q9H5H4 540 aaKnown RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 WDR41Q9HAD4 459 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ABCB9Q9NP78 766 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 RGS18Q9NS28 235 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 EXD2Q9NVH0 621 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 MS4A12Q9NXJ0 267 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 DPP3Q9NY33 737 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 NDRG3Q9UGV2 375 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 USP22Q9UPT9 525 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 CDK5RAP2Q96SN8 1893 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 TEX13CA0A0J9YWL9 993 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 RPS10-NUDT3A0A1W2PQS6 291 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 SLC22A23A1A5C7 686 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 TCAF2A6NFQ2 919 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 LRRTM2O43300 516 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 KCNAB3O43448 404 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 SNNO75324 88 aaPredicted RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 CELF2O95319 508 aaKnown RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 TNNC2P02585 160 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 S100A8P05109 93 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 STAG3L2P0CL84 134 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 NQO2P16083 231 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 NDUFB7P17568 137 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 CYP2F1P24903 491 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ACADLP28330 430 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 TM4SF1P30408 202 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 THBS2P35442 1172 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 SPAM1P38567 509 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 CLCN5P51795 746 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 RPL6Q02878 288 aaKnown RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 CBFBQ13951 182 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 PUM1Q14671 1186 aaKnown RBP eCLIP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 KCNAB1Q14722 419 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 EMC2Q15006 297 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 MEP1BQ16820 701 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ZIK1Q3SY52 487 aaPredicted RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 BSPRYQ5W0U4 402 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 SLC27A4Q6P1M0 643 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 SLC39A4Q6P5W5 647 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 STRADAQ7RTN6 431 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 P2RY8Q86VZ1 359 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 SIAH1Q8IUQ4 282 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 RBFAQ8N0V3 343 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 TOP6BLQ8N6T0 577 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 NAT16Q8N8M0 369 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 L3MBTL4Q8NA19 623 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 POGLUT1Q8NBL1 392 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 PIWIL2Q8TC59 973 aaKnown RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 DCAKDQ8WVC6 231 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 NARS2Q96I59 477 aaKnown RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 SERAC1Q96JX3 654 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ZNF558Q96NG5 402 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 KCNA7Q96RP8 456 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 NAA11Q9BSU3 229 aaPredicted RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ADGRE3Q9BY15 652 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ALX4Q9H161 411 aaPredicted RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 OR2AG1Q9H205 316 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 RAB9BQ9NP90 201 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 DCP1AQ9NPI6 582 aaPredicted RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ABCC13Q9NSE7 274 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 OPTCQ9UBM4 332 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 COL5A3P25940 1745 aaPredicted RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ATAD5Q96QE3 1844 aa4.52□□□□□ -1.69
LINC01109-201ENST00000603837 CNTNAP4Q9C0A0 1308 aa4.52□□□□□ -1.69
LINC01109-201ENST00000603837 ZNF99A8MXY4 864 aaPredicted RBP4.52□□□□□ -1.69
LINC01109-201ENST00000603837 KRBOX1C9JBD0 128 aa4.52□□□□□ -1.69
LINC01109-201ENST00000603837 DNASE2O00115 360 aaPredicted RBP4.52□□□□□ -1.69
LINC01109-201ENST00000603837 PAPSS1O43252 624 aaPredicted RBP4.52□□□□□ -1.69
LINC01109-201ENST00000603837 TRIM3O75382 744 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms