RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 DNASE1L3Q13609 305 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 AP5B1Q2VPB7 878 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF568Q3ZCX4 644 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 PDLIM3Q53GG5 364 aaPredicted RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 FGD3Q5JSP0 725 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 SPOUT1Q5T280 376 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 FAM160B1Q5W0V3 765 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 YRDCQ86U90 279 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 GPAT4Q86UL3 456 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 IRF2BP1Q8IU81 584 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ARHGAP12Q8IWW6 846 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 CENPLQ8N0S6 344 aaPredicted RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 BEST2Q8NFU1 509 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 OR5T2Q8NGG2 359 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 OR52B4Q8NGK2 314 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 GRHL3Q8TE85 626 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 TCEAL3Q969E4 200 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ESAMQ96AP7 390 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 BSCL2Q96G97 398 aaPredicted RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 APOLD1Q96LR9 279 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 C9orf72Q96LT7 481 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC25A23Q9BV35 468 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 PAPOLGQ9BWT3 736 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 NLNQ9BYT8 704 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 LDAHQ9H6V9 325 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 NANOGQ9H9S0 305 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 RGS18Q9NS28 235 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 GFOD1Q9NXC2 390 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 NKIRAS1Q9NYS0 192 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 RAPGEFL1Q9UHV5 662 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 OSGIN1Q9UJX0 560 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 C3orf18Q9UK00 162 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 CDYLQ9Y232 598 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 MYRFQ9Y2G1 1151 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ST14Q9Y5Y6 855 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ACTL7BQ9Y614 415 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 MYO5AQ9Y4I1 1855 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 UBE4BO95155 1302 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 AGAP5A6NIR3 686 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 MARCH11A6NNE9 402 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF785A8K8V0 405 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PDHXO00330 501 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 BRI3O95415 125 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CFIP05156 583 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CD3EP07766 207 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 GNAO1P09471 354 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 LYL1P12980 280 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 MTHFD2P13995 350 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 NT5EP21589 574 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 HOXA7P31268 230 aaPredicted RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CRHR1P34998 444 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ACTR1BP42025 376 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CRATP43155 626 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 YAP1P46937 504 aaKnown RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 DNA2P51530 1060 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 AKR1D1P51857 326 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PGDP52209 483 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 NDST2P52849 883 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 GALCP54803 685 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 TMBIM6P55061 237 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CDH13P55290 713 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 FAM3BP58499 235 aaPredicted RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 TXNL4AP83876 142 aaKnown RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CDH17Q12864 832 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 SSX2Q16385 188 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 EXT1Q16394 746 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CATSPEREQ5SY80 951 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 RNF111Q6ZNA4 994 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CFAP77Q6ZQR2 320 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC22A16Q86VW1 577 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 HIPK1Q86Z02 1210 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 NUDCD3Q8IVD9 361 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 LNX2Q8N448 690 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CPEB3Q8NE35 698 aaKnown RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 FAM110DQ8TAY7 271 aaPredicted RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 PIWIL2Q8TC59 973 aaKnown RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 REPS1Q96D71 796 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 RNF170Q96K19 258 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CSPG4P5Q96PW8 444 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF559Q9BR84 538 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 FEM1AQ9BSK4 669 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 GTPBP2Q9BX10 602 aaKnown RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 GPR88Q9GZN0 384 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ALX4Q9H161 411 aaPredicted RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 FOLH1BQ9HBA9 442 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 MRPS30Q9NP92 439 aaKnown RBP4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 IL26Q9NPH9 171 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 MAN2C1Q9NTJ4 1040 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 OLAHQ9NV23 265 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CLDND1Q9NY35 253 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 SHOC2Q9UQ13 582 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 INSL6Q9Y581 213 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 LTN1O94822 1766 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 A0A0B4J293 547 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 A0A1B0GW15 77 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 FAM230AA0A1W2PPH8 454 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 A0A1W2PRG0 241 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 CGB1A6NKQ9 187 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 ADARB2-AS1A8MUL3 147 aa4.79□□□□□ -1.64
SPTBN1-206ENST00000602898 TFECO14948 347 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms