RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 DDI2Q5TDH0 399 aa18.47■□□□□ 0.55
ARHGEF1-218ENST00000599589 NPAS4Q8IUM7 802 aa18.47■□□□□ 0.55
ARHGEF1-218ENST00000599589 DENND1CQ8IV53 801 aa18.47■□□□□ 0.55
ARHGEF1-218ENST00000599589 OMA1Q96E52 524 aa18.47■□□□□ 0.55
ARHGEF1-218ENST00000599589 TMEM175Q9BSA9 504 aa18.47■□□□□ 0.55
ARHGEF1-218ENST00000599589 MRPL9Q9BYD2 267 aaKnown RBP18.47■□□□□ 0.55
ARHGEF1-218ENST00000599589 TRIM45Q9H8W5 580 aaPredicted RBP18.47■□□□□ 0.55
ARHGEF1-218ENST00000599589 MCUBQ9NWR8 336 aa18.47■□□□□ 0.55
ARHGEF1-218ENST00000599589 VPS29Q9UBQ0 182 aa18.47■□□□□ 0.55
ARHGEF1-218ENST00000599589 BTNL2Q9UIR0 455 aa18.47■□□□□ 0.55
ARHGEF1-218ENST00000599589 BRCA2P51587 3418 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 TSC22D2O75157 780 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 IL1AP01583 271 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 GALTP07902 379 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 IGFBP1P08833 259 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 PCSK2P16519 638 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 ZNF30P17039 623 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 XCR1P46094 333 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 TOR2AQ5JU69 321 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 ANKS3Q6ZW76 656 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 NANOGP1Q8N7R0 232 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 OR6K2Q8NGY2 324 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 C2orf15Q8WU43 125 aaKnown RBP18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 ATG10Q9H0Y0 220 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 ZFYVE1Q9HBF4 777 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 FZD3Q9NPG1 666 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 NLKQ9UBE8 527 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 HCSTQ9UBK5 93 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 CCDC88CQ9P219 2028 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 PRAMEF33A0A0G2JMD5 474 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 PITPNM1O00562 1244 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 PRAMEF10O60809 474 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 CLDN11O75508 207 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 CLDN7O95471 211 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 VNN2O95498 520 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 DUSP4Q13115 394 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 SCARB2Q14108 478 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 ZBED6CLQ96FA7 236 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 GFM1Q96RP9 751 aaKnown RBP18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 GTPBP2Q9BX10 602 aaKnown RBP18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 KCTD5Q9NXV2 234 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 LHX3Q9UBR4 397 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 MALT1Q9UDY8 824 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 ENOPH1Q9UHY7 261 aa18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 FCF1Q9Y324 198 aaKnown RBP18.46■□□□□ 0.55
ARHGEF1-218ENST00000599589 TRIM3O75382 744 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 SOX14O95416 240 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 LGI1O95970 557 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 SDC2P34741 201 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 SLC6A12P48065 614 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 MVDP53602 400 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 ACSM2AQ08AH3 577 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 NFE2L1Q14494 772 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 ACSM2BQ68CK6 577 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 TMIGD1Q6UXZ0 262 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 CLDN22Q8N7P3 220 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 C19orf18Q8NEA5 215 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 VPS37AQ8NEZ2 397 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 MYO19Q96H55 970 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 NELL2Q99435 816 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 HTATIP2Q9BUP3 242 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 RACGAP1Q9H0H5 632 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 PRM3Q9NNZ6 103 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 TMCC3Q9ULS5 477 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 RUVBL1Q9Y265 456 aaKnown RBP18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 TRBV5-4A0A0C4DH59 114 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 GLYATL1P3A0A0U1RQE8 302 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 FADS2P1A8MWK0 482 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 CDK2AP1O14519 115 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 SLC2A2P11168 524 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 MLLT11Q13015 90 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 CRIPAKQ8N1N5 446 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 LSMEM1Q8N8F7 131 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 UPRTQ96BW1 309 aa18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 RBFOX1Q9NWB1 397 aaKnown RBP18.45■□□□□ 0.54
ARHGEF1-218ENST00000599589 WASHC1A8K0Z3 465 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 MYL12BO14950 172 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 SCO1O75880 301 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 JUPP14923 745 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 BPIP17213 487 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 CD22P20273 847 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 CCR7P32248 378 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 PRMT2P55345 433 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 RHOAP61586 193 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 NCF4Q15080 339 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 WSCD2Q2TBF2 565 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 ARMC12Q5T9G4 340 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 MEDAGQ5VYS4 303 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 TRIQKQ629K1 86 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 HSDL2Q6YN16 418 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 GEMIN6Q8WXD5 167 aaKnown RBP18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 SLC6A18Q96N87 628 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 DNAJC11Q9NVH1 559 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 YARS2Q9Y2Z4 477 aaKnown RBP18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 HIST1H2AGP0C0S8 130 aaPredicted RBP18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 ZDHHC11BP0C7U3 371 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 HIST1H2ADP20671 130 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 EVI2BP34910 448 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 SLC11A2P49281 568 aa18.44■□□□□ 0.54
ARHGEF1-218ENST00000599589 HMGA2P52926 109 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms