RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TM4SF19Q96DZ7 209 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 TSNARE1Q96NA8 513 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 SIGLEC12Q96PQ1 595 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 GPR21Q99679 349 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 WDR83Q9BRX9 315 aaKnown RBP8.85□□□□□ -0.99
BRCA1-226ENST00000591534 TRIM8Q9BZR9 551 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 PLAC1Q9HBJ0 212 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 PPANQ9NQ55 473 aaKnown RBP8.85□□□□□ -0.99
BRCA1-226ENST00000591534 FBXO6Q9NRD1 293 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-226ENST00000591534 C20orf96Q9NUD7 363 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-226ENST00000591534 ANKRD10Q9NXR5 420 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 TAS2R13Q9NYV9 303 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 NINJ2Q9NZG7 142 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 SLC17A6Q9P2U8 582 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 MED16Q9Y2X0 877 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 NAALAD2Q9Y3Q0 740 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 PCDHB14Q9Y5E9 798 aa8.85□□□□□ -0.99
BRCA1-226ENST00000591534 PSMD12O00232 456 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-226ENST00000591534 TP73O15350 636 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 NDUFS4O43181 175 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 RDH16O75452 317 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 FHP07954 510 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 SLC26A5P58743 744 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 CSNK1G2P78368 415 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 ADORA2A-AS1P86434 159 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 RHAGQ02094 409 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 CTBP1Q13363 440 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 CRYMQ14894 314 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 HP1BP3Q5SSJ5 553 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-226ENST00000591534 GRTP1Q5TC63 336 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 ZNF549Q6P9A3 640 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 PAOXQ6QHF9 649 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 AGTRAPQ6RW13 159 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 LCTLQ6UWM7 567 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 CYHR1Q6ZMK1 362 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-226ENST00000591534 STRA8Q7Z7C7 330 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 CPNE9Q8IYJ1 553 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 MFSD9Q8NBP5 474 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 GIMAP7Q8NHV1 300 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 CD200R1Q8TD46 325 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 ACMSDQ8TDX5 336 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 AGAP11Q8TF27 550 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 ASB5Q8WWX0 329 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 TSPAN17Q96FV3 270 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 CERS2Q96G23 380 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 PEX11GQ96HA9 241 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 VPS39Q96JC1 886 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 TEP1Q99973 2627 aaKnown RBP8.84□□□□□ -0.99
BRCA1-226ENST00000591534 IQCGQ9H095 443 aaKnown RBP8.84□□□□□ -0.99
BRCA1-226ENST00000591534 CDCP1Q9H5V8 836 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 SSU72Q9NP77 194 aaKnown RBP8.84□□□□□ -0.99
BRCA1-226ENST00000591534 MOCS1Q9NZB8 636 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 FBXO5Q9UKT4 447 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 CHMP2BQ9UQN3 213 aa8.84□□□□□ -0.99
BRCA1-226ENST00000591534 KLF13Q9Y2Y9 288 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-226ENST00000591534 MDC1Q14676 2089 aaKnown RBP8.84□□□□□ -0.99
BRCA1-226ENST00000591534 DOCK10Q96BY6 2186 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 SVILO95425 2214 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 TCRBV9S1A1TA0A576 114 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 FEZF1A0PJY2 475 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 SYNDIG1LA6NDD5 238 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 TFECO14948 347 aaPredicted RBP8.83□□□□□ -1
BRCA1-226ENST00000591534 OR1F1O43749 312 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 NME2P1O60361 137 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 CDC123O75794 336 aaPredicted RBP8.83□□□□□ -1
BRCA1-226ENST00000591534 NEURL1O76050 574 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 STATHP02808 62 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 SERPIND1P05546 499 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 SNRPAP09012 282 aaKnown RBP8.83□□□□□ -1
BRCA1-226ENST00000591534 CDH1P12830 882 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 ALOX12P18054 663 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 KRT15P19012 456 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 PTGS2P35354 604 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 GP5P40197 560 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 SLC1A2P43004 574 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 HLCSP50747 726 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 PGGT1BP53609 377 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 SLC18A1P54219 525 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 SLC12A2P55011 1212 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 AP1S2P56377 157 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 TLE4Q04727 773 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 NAE1Q13564 534 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 CSHL1Q14406 222 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 PRSS41Q7RTY9 318 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 PIWIL4Q7Z3Z4 852 aaKnown RBP8.83□□□□□ -1
BRCA1-226ENST00000591534 CDH24Q86UP0 819 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 CTAGE3PQ8IX95 158 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 GSPT2Q8IYD1 628 aaKnown RBP8.83□□□□□ -1
BRCA1-226ENST00000591534 FAM169BQ8N8A8 192 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 KCT2Q8NC54 265 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 TRPV3Q8NET8 790 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 ABHD11Q8NFV4 315 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 ELP5Q8TE02 316 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 CFAP36Q96G28 342 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 ATP6V1G3Q96LB4 118 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 PTCHD1Q96NR3 888 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 ZIM3Q96PE6 472 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 SMC6Q96SB8 1091 aa8.83□□□□□ -1
BRCA1-226ENST00000591534 SH3GL2Q99962 352 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms