RNA–Protein interactions for RNA: ENST00000589742.5

RFX2-215, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-215	ENST00000589742	TSFM	P43897	325 aa	Known RBP	11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	RRAD	P55042	308 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	OR4D2	P58180	307 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	ID2	Q02363	134 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	ACTN3	Q08043	901 aa	Predicted RBP	11.2	□□□□□ -0.62
RFX2-215	ENST00000589742		Q0VFX4	171 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	GALNT1	Q10472	559 aa	Predicted RBP	11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	CSTF3	Q12996	717 aa	Known RBP	11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	SLC13A2	Q13183	592 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	PCOLCE	Q15113	449 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	SFT2D3	Q587I9	215 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	CCNYL2	Q5T2Q4	361 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	MRM1	Q6IN84	353 aa	Known RBP	11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	QSOX2	Q6ZRP7	698 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	RIPOR1	Q6ZS17	1223 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	NDUFAF7	Q7L592	441 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	COMMD6	Q7Z4G1	85 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	GPR180	Q86V85	440 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	NUDT13	Q86X67	352 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	OR4N5	Q8IXE1	308 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	C1orf52	Q8N6N3	182 aa	Known RBP	11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	CHTF18	Q8WVB6	975 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	ABHD17A	Q96GS6	310 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	ATP6V1G3	Q96LB4	118 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	SH3GL2	Q99962	352 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	TRMO	Q9BU70	441 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	SEMA4C	Q9C0C4	833 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	C20orf27	Q9GZN8	174 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	TUBB1	Q9H4B7	451 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	EML4	Q9HC35	981 aa	Known RBP	11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	PRDM9	Q9NQV7	894 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	ZNF446	Q9NWS9	450 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	NMRK1	Q9NWW6	199 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	ZDHHC2	Q9UIJ5	367 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	TRAF6	Q9Y4K3	522 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	ASB4	Q9Y574	426 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	DOCK10	Q96BY6	2186 aa		11.2	□□□□□ -0.62
RFX2-215	ENST00000589742	ATRX	P46100	2492 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	CNTRL	Q7Z7A1	2325 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742		A0A1W2PR48	441 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	GLOD5	A6NK44	160 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	PROM1	O43490	865 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	LDB3	O75112	727 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	HP	P00738	406 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	NR1D1	P20393	614 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	ITGA3	P26006	1051 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	PPP2R1B	P30154	601 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	ARFIP1	P53367	373 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	ABCE1	P61221	599 aa	Known RBP	11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	KCNAB2	Q13303	367 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	IMPG1	Q17R60	797 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	SPDYA	Q5MJ70	313 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	SH2D4B	Q5SQS7	431 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	KANK2	Q63ZY3	851 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	PAGE2	Q7Z2X7	111 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	SCUBE1	Q8IWY4	988 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	ZNF595	Q8IYB9	648 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	CLYBL	Q8N0X4	340 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	GBP7	Q8N8V2	638 aa	Predicted RBP	11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	CLEC1A	Q8NC01	280 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	FDCSP	Q8NFU4	85 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	VPS50	Q96JG6	964 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	WDR77	Q9BQA1	342 aa	Predicted RBP	11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	ZNF700	Q9H0M5	742 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	ZNF71	Q9NQZ8	489 aa	Predicted RBP	11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	PNO1	Q9NRX1	252 aa	Known RBP	11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	LYAR	Q9NX58	379 aa	Known RBP	11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	NKIRAS1	Q9NYS0	192 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	MRPS33	Q9Y291	106 aa	Known RBP	11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	MMACHC	Q9Y4U1	282 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	CLDN16	Q9Y5I7	305 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	DNAJC15	Q9Y5T4	150 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	SPACA6	W5XKT8	324 aa		11.19	□□□□□ -0.62
RFX2-215	ENST00000589742	IGKV3D-11	A0A0A0MRZ8	115 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	SERTM1	A2A2V5	107 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	MKRN2OS	H3BPM6	223 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	ATXN7	O15265	892 aa	Predicted RBP	11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	CTNS	O60931	367 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	HSPA4L	O95757	839 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	PDGFA	P04085	211 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	CYC1	P08574	325 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	FGF4	P08620	206 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	LINC00032	P0C843	101 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	SERPINB5	P36952	375 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	SLC1A6	P48664	564 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	MAPK12	P53778	367 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	SLC18A1	P54219	525 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	HSD17B7	P56937	341 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	RAE1	P78406	368 aa	Known RBP	11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	TNFRSF17	Q02223	184 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	ZNF33B	Q06732	778 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	AIMP2	Q13155	320 aa	Known RBP	11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	STX3	Q13277	289 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	UGT3A2	Q3SY77	523 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	PAPD4	Q6PIY7	484 aa	Known RBP	11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	TRIM46	Q7Z4K8	759 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	MMP21	Q8N119	569 aa		11.18	□□□□□ -0.62
RFX2-215	ENST00000589742	GALNT16	Q8N428	558 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms