RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 UGT3A1Q6NUS8 523 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 NEPROQ6NW34 567 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 CES3Q6UWW8 571 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 C20orf204Q6ZNR8 217 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 ABHD13Q7L211 337 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 SERPINA9Q86WD7 417 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 LRRC6Q86X45 466 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 MEX3DQ86XN8 651 aaKnown RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 GSPT2Q8IYD1 628 aaKnown RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 PIANPQ8IYJ0 282 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 FAM109AQ8N4B1 249 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 NFAM1Q8NET5 270 aaPredicted RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 OR51Q1Q8NH59 317 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 ELMO1Q92556 727 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 MFSD3Q96ES6 412 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 TSPAN17Q96FV3 270 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 CDKN2AIPNLQ96HQ2 116 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 LCORQ96JN0 433 aaPredicted RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 MARK4Q96L34 752 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 PANX3Q96QZ0 392 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 OR2A5Q96R48 311 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 DPH7Q9BTV6 452 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 RBCK1Q9BYM8 510 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 LANCL2Q9NS86 450 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 INTS10Q9NVR2 710 aaKnown RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 ALKBH4Q9NXW9 302 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 GALNT8Q9NY28 637 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 NINJ2Q9NZG7 142 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 KCMF1Q9P0J7 381 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 HCN3Q9P1Z3 774 aa5.63□□□□□ -1.51
VPS25-204ENST00000589577 CORO1CQ9ULV4 474 aaPredicted RBP5.63□□□□□ -1.51
VPS25-204ENST00000589577 IQANK1A0A1B0GTG1 560 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 ATP6AP2A0A1C7CYW4 349 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 TCRBV9S1A1TA0A576 114 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 CCDC162PA2VCL2 907 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 MAGEB17A8MXT2 336 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 EEF1E1-BLOC1S5C9J1V9 151 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 POC1B-GALNT4F8VUJ3 575 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 ACOT7O00154 380 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 DYNC1I1O14576 645 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 PRMT5O14744 637 aaPredicted RBP5.62□□□□□ -1.51
VPS25-204ENST00000589577 KPNA5O15131 536 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 CD3EAPO15446 510 aaKnown RBP5.62□□□□□ -1.51
VPS25-204ENST00000589577 EEF1E1O43324 174 aaKnown RBP5.62□□□□□ -1.51
VPS25-204ENST00000589577 RIPK2O43353 540 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 GPRIN2O60269 458 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 KDM1AO60341 852 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 BANF1O75531 89 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 ITGA10O75578 1167 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 ATP6AP2O75787 350 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 CDC123O75794 336 aaPredicted RBP5.62□□□□□ -1.51
VPS25-204ENST00000589577 EPPINO95925 133 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 FTH1P02794 183 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 OR56A5P0C7T3 313 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 CNTFP26441 200 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 SSTR1P30872 391 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 TIMP3P35625 211 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 GP5P40197 560 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 MAN2A2P49641 1150 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 CSE1LP55060 971 aaKnown RBP5.62□□□□□ -1.51
VPS25-204ENST00000589577 PLGLB1Q02325 96 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 ACVR1Q04771 509 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 VEZF1Q14119 521 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 FAM53BQ14153 422 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 FASTKD3Q14CZ7 662 aaKnown RBP5.62□□□□□ -1.51
VPS25-204ENST00000589577 TRADDQ15628 312 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 NSDHLQ15738 373 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 DBN1Q16643 649 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 KCTD19Q17RG1 926 aaPredicted RBP5.62□□□□□ -1.51
VPS25-204ENST00000589577 CLEC12BQ2HXU8 276 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 TTLL9Q3SXZ7 439 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 MSS51Q4VC12 460 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 HSP90B2PQ58FF3 399 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 HSP90AA5PQ58FG0 334 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 WIPI1Q5MNZ9 446 aaPredicted RBP5.62□□□□□ -1.51
VPS25-204ENST00000589577 PTRHD1Q6GMV3 140 aaKnown RBP5.62□□□□□ -1.51
VPS25-204ENST00000589577 RGS9BPQ6ZS82 235 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 CYS1Q717R9 158 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 HDXQ7Z353 690 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 SLC22A16Q86VW1 577 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 SLC26A11Q86WA9 606 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 PDSS2Q86YH6 399 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 DCUN1D3Q8IWE4 304 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 SLC22A15Q8IZD6 547 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 RIBC1Q8N443 379 aaPredicted RBP5.62□□□□□ -1.51
VPS25-204ENST00000589577 MREGQ8N565 214 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 PPM1NQ8N819 430 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 APCDD1LQ8NCL9 501 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 HMGCLL1Q8TB92 370 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 FBF1Q8TES7 1133 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 AENQ8WTP8 325 aaKnown RBP5.62□□□□□ -1.51
VPS25-204ENST00000589577 ISL2Q96A47 359 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 SARAFQ96BY9 339 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 ZBED6CLQ96FA7 236 aaPredicted RBP5.62□□□□□ -1.51
VPS25-204ENST00000589577 CCDC138Q96M89 665 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 CPNE1Q99829 537 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 EPB41L4BQ9H329 900 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 ACSS3Q9H6R3 686 aa5.62□□□□□ -1.51
VPS25-204ENST00000589577 IARS2Q9NSE4 1012 aaKnown RBP5.62□□□□□ -1.51
VPS25-204ENST00000589577 TREX1Q9NSU2 369 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms