RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 GIMAP2Q9UG22 337 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 DCTN4Q9UJW0 460 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 FBXW2Q9UKT8 454 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 PADI2Q9Y2J8 665 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 ATG4BQ9Y4P1 393 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 SCN3AQ9NY46 2000 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 SDK2Q58EX2 2172 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 LOC101059948A0A1B0GTJ6 334 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 A0A1W2PR48 441 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 C1orf226A1L170 272 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 SYNDIG1LA6NDD5 238 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 PCDH17O14917 1159 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 CTNSO60931 367 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 KLF7O75840 302 aaPredicted RBP11.47□□□□□ -0.57
DNMT1-218ENST00000589294 RECKO95980 971 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 DRD4P21917 467 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 DLSTP36957 453 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 ARFIP2P53365 341 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 HNRNPH2P55795 449 aaKnown RBP11.47□□□□□ -0.57
DNMT1-218ENST00000589294 HSD17B7P56937 341 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 TAS2R50P59544 299 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 DNASE1L3Q13609 305 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 COL9A2Q14055 689 aaPredicted RBP11.47□□□□□ -0.57
DNMT1-218ENST00000589294 GSTA3Q16772 222 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 LSM12Q3MHD2 195 aaKnown RBP11.47□□□□□ -0.57
DNMT1-218ENST00000589294 VWA2Q5GFL6 755 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 NDUFAF5Q5TEU4 345 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 CGB2Q6NT52 195 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 FAM198BQ6UWH4 519 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 ZC3H7AQ8IWR0 971 aaKnown RBP11.47□□□□□ -0.57
DNMT1-218ENST00000589294 TMEM132CQ8N3T6 1108 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 OR2Y1Q8NGV0 311 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 RFWD2Q8NHY2 731 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 NACC2Q96BF6 587 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 OR52B2Q96RD2 323 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 TMEM121BQ9BXQ6 578 aaPredicted RBP11.47□□□□□ -0.57
DNMT1-218ENST00000589294 RPF2Q9H7B2 306 aaKnown RBP11.47□□□□□ -0.57
DNMT1-218ENST00000589294 MYNNQ9NPC7 610 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 LANCL2Q9NS86 450 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 CTSFQ9UBX1 484 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 CROTQ9UKG9 612 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 PSME2Q9UL46 239 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 MAPRE3Q9UPY8 281 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 DLGAP4Q9Y2H0 992 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 MMACHCQ9Y4U1 282 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 POLR3HQ9Y535 204 aaPredicted RBP11.47□□□□□ -0.57
DNMT1-218ENST00000589294 PCDHA9Q9Y5H5 950 aa11.47□□□□□ -0.57
DNMT1-218ENST00000589294 A0A0G2JND7 137 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 FAM227AF5H4B4 570 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 UBDO15205 165 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 PRMT3O60678 531 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 IGHEP01854 428 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 G6PDP11413 515 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 IDO1P14902 403 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 SDC1P18827 310 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 TACR1P25103 407 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 PPP2R1BP30154 601 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 EMP2P54851 167 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 CLDN8P56748 225 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 FOXK2Q01167 660 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 TNFRSF17Q02223 184 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 KLC1Q07866 573 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 C2orf80Q0P641 193 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 CLN3Q13286 438 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 ERV3-1Q14264 604 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 SSPNQ14714 243 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 TGIF1Q15583 401 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 C18orf63Q68DL7 685 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 FAM71E1Q6IPT2 247 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 QSOX2Q6ZRP7 698 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 CLNKQ7Z7G1 428 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 LAPTM4BQ86VI4 370 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 LIX1Q8N485 282 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 EFCAB3Q8N7B9 438 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 ENDOVQ8N8Q3 282 aaKnown RBP11.46□□□□□ -0.57
DNMT1-218ENST00000589294 PLPP5Q8NEB5 264 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 MTERF3Q96E29 417 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 THOC1Q96FV9 657 aaKnown RBP11.46□□□□□ -0.57
DNMT1-218ENST00000589294 RILPQ96NA2 401 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 SPSB2Q99619 263 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 EBF4Q9BQW3 602 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 C1orf50Q9BV19 199 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 EBPLQ9BY08 206 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 GPN2Q9H9Y4 310 aaPredicted RBP11.46□□□□□ -0.57
DNMT1-218ENST00000589294 TEX10Q9NXF1 929 aaPredicted RBP11.46□□□□□ -0.57
DNMT1-218ENST00000589294 TAS2R7Q9NYW3 318 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 EHD3Q9NZN3 535 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 BAIAP2L1Q9UHR4 511 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 TCFL5Q9UL49 500 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 MKL2Q9ULH7 1088 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 TRIM33Q9UPN9 1127 aa11.46□□□□□ -0.57
DNMT1-218ENST00000589294 ASPMQ8IZT6 3477 aa11.45□□□□□ -0.58
DNMT1-218ENST00000589294 IDSB3KWA1 339 aa11.45□□□□□ -0.58
DNMT1-218ENST00000589294 PGRMC2O15173 223 aa11.45□□□□□ -0.58
DNMT1-218ENST00000589294 TLX3O43711 291 aaPredicted RBP11.45□□□□□ -0.58
DNMT1-218ENST00000589294 TBX19O60806 448 aa11.45□□□□□ -0.58
DNMT1-218ENST00000589294 B4GALT2O60909 372 aa11.45□□□□□ -0.58
DNMT1-218ENST00000589294 CNOT3O75175 753 aaKnown RBP11.45□□□□□ -0.58
DNMT1-218ENST00000589294 JRKO75564 520 aa11.45□□□□□ -0.58
DNMT1-218ENST00000589294 GPR75O95800 540 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms