RNA–Protein interactions for RNA: ENST00000588896.1

CACNA2D4-224, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-224ENST00000588896 PAIP2Q9BPZ3 127 aaKnown RBP12.85□□□□□ -0.35
CACNA2D4-224ENST00000588896 MESP1Q9BRJ9 268 aa12.85□□□□□ -0.35
CACNA2D4-224ENST00000588896 ACPTQ9BZG2 426 aa12.85□□□□□ -0.35
CACNA2D4-224ENST00000588896 WDR41Q9HAD4 459 aa12.85□□□□□ -0.35
CACNA2D4-224ENST00000588896 PRTFDC1Q9NRG1 225 aa12.85□□□□□ -0.35
CACNA2D4-224ENST00000588896 IGSF10Q6WRI0 2623 aa12.85□□□□□ -0.35
CACNA2D4-224ENST00000588896 MGAQ8IWI9 3026 aa12.85□□□□□ -0.35
CACNA2D4-224ENST00000588896 TCRBV16S1A1N1A0A5B0 115 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 A6NL46 340 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 TMEM114B3SHH9 223 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 TMPRSS11DO60235 418 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 CTNSO60931 367 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 CEACAM4O75871 244 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 SEC24DO94855 1032 aaPredicted RBP12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 SNUPNO95149 360 aaKnown RBP12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 ALPPP05187 535 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 CHRNGP07510 517 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 NR2F6P10588 404 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 ICAM2P13598 275 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 ITGA3P26006 1051 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 MAPK12P53778 367 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 SOX8P57073 446 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 OR4D2P58180 307 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 HMGCS1Q01581 520 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 TNFRSF17Q02223 184 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 ACTN3Q08043 901 aaPredicted RBP12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 ACSM2AQ08AH3 577 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 TBL3Q12788 808 aaKnown RBP12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 STX4Q12846 297 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 PCOLCEQ15113 449 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 CHI3L2Q15782 390 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 SPIN4Q56A73 249 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 SFT2D3Q587I9 215 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 SH2D4BQ5SQS7 431 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 KANK2Q63ZY3 851 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 ACSM2BQ68CK6 577 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 CLEC6AQ6EIG7 209 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 KBTBD2Q8IY47 623 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 CLYBLQ8N0X4 340 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 C1orf52Q8N6N3 182 aaKnown RBP12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 OR6Y1Q8NGX8 325 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 LPAR4Q99677 370 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 SLC25A23Q9BV35 468 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 MLXIPLQ9NP71 852 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 GPR83Q9NYM4 423 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 FIS1Q9Y3D6 152 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 PCDHGA9Q9Y5G4 932 aaKnown RBP12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 FER1L5A0AVI2 2057 aa12.84□□□□□ -0.35
CACNA2D4-224ENST00000588896 UQCRHLA0A096LP55 91 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 HMGB1P1B2RPK0 211 aaPredicted RBP12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 SLC28A1O00337 649 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 RGS14O43566 566 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 HSPA4LO95757 839 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 GBAP04062 536 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 SERPINA7P05543 415 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 UQCRHP07919 91 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 FGF4P08620 206 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 TPP2P29144 1249 aaPredicted RBP12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 SERPINB3P29508 390 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 PPP2R1BP30154 601 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 PGDP52209 483 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 HNRNPFP52597 415 aaKnown RBP12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 HNRNPH2P55795 449 aaKnown RBP12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 SERTAD2Q14140 314 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 LY6DQ14210 128 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 MYBPC3Q14896 1274 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 EXT1Q16394 746 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 SPDYAQ5MJ70 313 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 FAM219BQ5XKK7 198 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 MRM1Q6IN84 353 aaKnown RBP12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 PAPD4Q6PIY7 484 aaKnown RBP12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 SCIMPQ6UWF3 145 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 RIPOR1Q6ZS17 1223 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 RNF165Q6ZSG1 346 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 TRIM46Q7Z4K8 759 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 PARP9Q8IXQ6 854 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 KIRREL3Q8IZU9 778 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 EXD3Q8N9H8 876 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 TMEM52Q8NDY8 209 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 MGARPQ8TDB4 240 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 TANKQ92844 425 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 ARL8AQ96BM9 186 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 ABHD17AQ96GS6 310 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 SH3GL2Q99962 352 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 LHPPQ9H008 270 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 RPF2Q9H7B2 306 aaKnown RBP12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 TNFRSF12AQ9NP84 129 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 NECTIN3Q9NQS3 549 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 TRAF6Q9Y4K3 522 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 ATG4BQ9Y4P1 393 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 ASB4Q9Y574 426 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 MDC1Q14676 2089 aaKnown RBP12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 LOC400499M0QZD8 3231 aa12.83□□□□□ -0.36
CACNA2D4-224ENST00000588896 IGHV3-20A0A0C4DH32 117 aa12.82□□□□□ -0.36
CACNA2D4-224ENST00000588896 EIF4E1BA6NMX2 242 aaKnown RBP12.82□□□□□ -0.36
CACNA2D4-224ENST00000588896 PROM1O43490 865 aa12.82□□□□□ -0.36
CACNA2D4-224ENST00000588896 PCDH7O60245 1069 aa12.82□□□□□ -0.36
CACNA2D4-224ENST00000588896 RSL1D1O76021 490 aaKnown RBP12.82□□□□□ -0.36
CACNA2D4-224ENST00000588896 AIFM1O95831 613 aa12.82□□□□□ -0.36
CACNA2D4-224ENST00000588896 CHN1P15882 459 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms