RNA–Protein interactions for RNA: ENST00000580642.2

SS18-215, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-215ENST00000580642 A0A096LPI6 279 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 A0A0G2JN53 185 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 A0A1B0GX78 115 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 FOXS1O43638 330 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 SCN2BO60939 215 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 LRATO95237 230 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 KCNH1O95259 989 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 STATHP02808 62 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 IFI6P09912 130 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 ZCCHC18P0CG32 403 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 LAMP1P11279 417 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 RNH1P13489 461 aaKnown RBP14.44□□□□□ -0.1
SS18-215ENST00000580642 IL1RNP18510 177 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 CPN2P22792 545 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 DGKQP52824 942 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 WNT3P56703 355 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 RAB15P59190 212 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 INSM1Q01101 510 aaPredicted RBP14.44□□□□□ -0.1
SS18-215ENST00000580642 RUNX2Q13950 521 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 CEBPEQ15744 281 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 RETREG3Q86VR2 466 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 PDSS2Q86YH6 399 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 AMER3Q8N944 861 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 OR7A2PQ8NGA2 310 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 GOT1L1Q8NHS2 421 aaPredicted RBP14.44□□□□□ -0.1
SS18-215ENST00000580642 CDC26Q8NHZ8 85 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 OR5P2Q8WZ92 322 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 LRRC58Q96CX6 371 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 ZBED6CLQ96FA7 236 aaPredicted RBP14.44□□□□□ -0.1
SS18-215ENST00000580642 LIN37Q96GY3 246 aaPredicted RBP14.44□□□□□ -0.1
SS18-215ENST00000580642 DEPDC7Q96QD5 511 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 PHF12Q96QT6 1004 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 OR1F2PQ96R84 312 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 OR6C1Q96RD1 312 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 GPATCH1Q9BRR8 931 aaKnown RBP14.44□□□□□ -0.1
SS18-215ENST00000580642 ZPBPQ9BS86 351 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 NEUROD4Q9HD90 331 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 SLC35C2Q9NQQ7 365 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 GIMAP4Q9NUV9 329 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 TEX10Q9NXF1 929 aaPredicted RBP14.44□□□□□ -0.1
SS18-215ENST00000580642 CROTQ9UKG9 612 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 PCDHGB4Q9UN71 923 aa14.44□□□□□ -0.1
SS18-215ENST00000580642 MRPS2Q9Y399 296 aaKnown RBP14.44□□□□□ -0.1
SS18-215ENST00000580642 ASPDHA6ND91 283 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 CYR61O00622 381 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 ZNF749O43361 778 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 GDF9O60383 454 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 DNAJA2O60884 412 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 SLITRK5O94991 958 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 AIFM1O95831 613 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 ITGAXP20702 1163 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 MAGEA8P43361 318 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 CPA2P48052 419 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 PDX1P52945 283 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 PCBP4P57723 403 aaKnown RBP14.43□□□□□ -0.1
SS18-215ENST00000580642 PHC1P78364 1004 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 NFYCQ13952 458 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 DSG2Q14126 1118 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 SPRED3Q2MJR0 410 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 RINLQ6ZS11 566 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 ZNF595Q8IYB9 648 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 CA13Q8N1Q1 262 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 EFCAB3Q8N7B9 438 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 TRIML2Q8N7C3 387 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 BMPERQ8N8U9 685 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 OR9A4Q8NGU2 314 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 ZFP28Q8NHY6 868 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 GFM2Q969S9 779 aaKnown RBP14.43□□□□□ -0.1
SS18-215ENST00000580642 LRFN5Q96NI6 719 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 RAB3IPQ96QF0 476 aaPredicted RBP14.43□□□□□ -0.1
SS18-215ENST00000580642 NPAS2Q99743 824 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 MAPKAP1Q9BPZ7 522 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 DPH2Q9BQC3 489 aaPredicted RBP14.43□□□□□ -0.1
SS18-215ENST00000580642 B3GNT4Q9C0J1 378 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 RPF2Q9H7B2 306 aaKnown RBP14.43□□□□□ -0.1
SS18-215ENST00000580642 SPAG4Q9NPE6 437 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 STARD5Q9NSY2 213 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 TOR4AQ9NXH8 423 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 FBXW2Q9UKT8 454 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 CES1P1Q9UKY3 287 aa14.43□□□□□ -0.1
SS18-215ENST00000580642 VPS13AQ96RL7 3174 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 ASCC3Q8N3C0 2202 aaKnown RBP14.42□□□□□ -0.1
SS18-215ENST00000580642 A0A0A6YYC8 382 aaPredicted RBP14.42□□□□□ -0.1
SS18-215ENST00000580642 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.42□□□□□ -0.1
SS18-215ENST00000580642 I3L1I5 382 aaPredicted RBP14.42□□□□□ -0.1
SS18-215ENST00000580642 SGK494L7N484 410 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 CLDN4O14493 209 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 RFXANKO14593 260 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 POLR1CO15160 346 aaPredicted RBP14.42□□□□□ -0.1
SS18-215ENST00000580642 GSC2O15499 205 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 CHST10O43529 356 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 CTSBP07858 339 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 CD1EP15812 388 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 PPIBP23284 216 aaKnown RBP14.42□□□□□ -0.1
SS18-215ENST00000580642 NTSP30990 170 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 MPIP34949 423 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 MC1RQ01726 317 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 NHLH1Q02575 133 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 C16orf72Q14CZ0 275 aa14.42□□□□□ -0.1
SS18-215ENST00000580642 ISXQ2M1V0 245 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms