RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 ACER2Q5QJU3 275 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 ZNF678Q5SXM1 525 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 MRM1Q6IN84 353 aaKnown RBP13.07□□□□□ -0.32
GGA3-203ENST00000577435 EMBQ6PCB8 327 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 ARMC10Q8N2F6 343 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 CISD2Q8N5K1 135 aaKnown RBP13.07□□□□□ -0.32
GGA3-203ENST00000577435 FAM47BQ8NA70 645 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 CATSPER1Q8NEC5 780 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 OR4F6Q8NGB9 312 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 AENQ8WTP8 325 aaKnown RBP13.07□□□□□ -0.32
GGA3-203ENST00000577435 L3HYPDHQ96EM0 354 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 CSF3RQ99062 836 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 SERPINI1Q99574 410 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 PLA2G3Q9NZ20 509 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 VTI1BQ9UEU0 232 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 ZNF225Q9UK10 706 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 A0A1B0GTL3 188 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 OR5H15A6NDH6 313 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 VPS4BO75351 444 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 SUPT7LO94864 414 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 ETHE1O95571 254 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 KRT15P19012 456 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 CPN2P22792 545 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 SLCO1A2P46721 670 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 TAS2R50P59544 299 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 NAA20P61599 178 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 IGLV3-21P80748 117 aaPredicted RBP13.06□□□□□ -0.32
GGA3-203ENST00000577435 SLC18A2Q05940 514 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 IFT88Q13099 833 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 SERTAD2Q14140 314 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 CCDC153Q494R4 210 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 LETMD1Q6P1Q0 360 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 RPS27LQ71UM5 84 aaKnown RBP13.06□□□□□ -0.32
GGA3-203ENST00000577435 GPR180Q86V85 440 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 SLC5A8Q8N695 610 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 APCDD1LQ8NCL9 501 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 B3GNT7Q8NFL0 401 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 OR1N1Q8NGS0 311 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 CAVIN3Q969G5 261 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 CCDC126Q96EE4 140 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 CNDP1Q96KN2 507 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 NPAS2Q99743 824 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 SORBS1Q9BX66 1292 aaKnown RBP13.06□□□□□ -0.32
GGA3-203ENST00000577435 ALOXE3Q9BYJ1 711 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 ROPN1BQ9BZX4 212 aaPredicted RBP13.06□□□□□ -0.32
GGA3-203ENST00000577435 ROPN1Q9HAT0 212 aaPredicted RBP13.06□□□□□ -0.32
GGA3-203ENST00000577435 PRM3Q9NNZ6 103 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 ADAP2Q9NPF8 381 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 ASF1BQ9NVP2 202 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 TRPS1Q9UHF7 1281 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 PHF11Q9UIL8 331 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 EMCNQ9ULC0 261 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 GRID1Q9ULK0 1009 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 VPS4AQ9UN37 437 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 PCDHGB6Q9Y5F9 930 aa13.06□□□□□ -0.32
GGA3-203ENST00000577435 COPG1Q9Y678 874 aaKnown RBP13.06□□□□□ -0.32
GGA3-203ENST00000577435 USP9XQ93008 2570 aaPredicted RBP13.06□□□□□ -0.32
GGA3-203ENST00000577435 A0A0A6YYD5 115 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 A8MUA0 341 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 G3V2L1 256 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 PROM1O43490 865 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 UQCRHP07919 91 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 TLX1P31314 330 aaPredicted RBP13.05□□□□□ -0.32
GGA3-203ENST00000577435 ARL1P40616 181 aaPredicted RBP13.05□□□□□ -0.32
GGA3-203ENST00000577435 ZNF33BQ06732 778 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 ELAVL1Q15717 326 aaKnown RBP13.05□□□□□ -0.32
GGA3-203ENST00000577435 PRR30Q53SZ7 412 aaPredicted RBP13.05□□□□□ -0.32
GGA3-203ENST00000577435 TTC19Q6DKK2 380 aaPredicted RBP13.05□□□□□ -0.32
GGA3-203ENST00000577435 RPS19BP1Q86WX3 136 aaKnown RBP13.05□□□□□ -0.32
GGA3-203ENST00000577435 CRLF3Q8IUI8 442 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 TMEM132CQ8N3T6 1108 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 RIBC1Q8N443 379 aaPredicted RBP13.05□□□□□ -0.32
GGA3-203ENST00000577435 EPS8L3Q8TE67 593 aaKnown RBP13.05□□□□□ -0.32
GGA3-203ENST00000577435 TRPC4APQ8TEL6 797 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 TANKQ92844 425 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 ANKRD9Q96BM1 317 aaPredicted RBP13.05□□□□□ -0.32
GGA3-203ENST00000577435 MTFMTQ96DP5 389 aaKnown RBP13.05□□□□□ -0.32
GGA3-203ENST00000577435 C19orf60Q96EN9 201 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 TMEM237Q96Q45 408 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 ZNF382Q96SR6 550 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 SLC29A3Q9BZD2 475 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 ELOVL6Q9H5J4 265 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 BRF2Q9HAW0 419 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 PNO1Q9NRX1 252 aaKnown RBP13.05□□□□□ -0.32
GGA3-203ENST00000577435 LYARQ9NX58 379 aaKnown RBP13.05□□□□□ -0.32
GGA3-203ENST00000577435 AHSPQ9NZD4 102 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 ABI3Q9P2A4 366 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 ADAM29Q9UKF5 820 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 FBXW2Q9UKT8 454 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 SNX6Q9UNH7 406 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 STK38LQ9Y2H1 464 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 ATG4BQ9Y4P1 393 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 ASB4Q9Y574 426 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 COL12A1Q99715 3063 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 DOPEY2Q9Y3R5 2298 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 CROCCQ5TZA2 2017 aa13.05□□□□□ -0.32
GGA3-203ENST00000577435 CLEC18AA5D8T8 446 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 FOXO6A8MYZ6 492 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 PLIN3O60664 434 aa13.04□□□□□ -0.32
GGA3-203ENST00000577435 EEDO75530 441 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms