RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 ZNF700Q9H0M5 742 aa16.23■□□□□ 0.19
CLDN7-207ENST00000574070 NMRK1Q9NWW6 199 aa16.23■□□□□ 0.19
CLDN7-207ENST00000574070 PPT2Q9UMR5 302 aa16.23■□□□□ 0.19
CLDN7-207ENST00000574070 ZNF451Q9Y4E5 1061 aa16.23■□□□□ 0.19
CLDN7-207ENST00000574070 SCN2AQ99250 2005 aa16.23■□□□□ 0.19
CLDN7-207ENST00000574070 NUP210LQ5VU65 1888 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 A8MUA0 341 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 H3BQF6 201 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 K7EM74 188 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 TYROBPO43914 113 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 CEACAM4O75871 244 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 SEMA3DO95025 777 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 SCELO95171 688 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 ALPPP05187 535 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 ICAM2P13598 275 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 ARFIP1P53367 373 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 CASP8Q14790 479 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 MYBPC3Q14896 1274 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 BTBD16Q32M84 506 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 PAPD4Q6PIY7 484 aaKnown RBP16.22■□□□□ 0.19
CLDN7-207ENST00000574070 PAGE2Q7Z2X7 111 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 CLNKQ7Z7G1 428 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 LURAP1LQ8IV03 231 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 ZNF595Q8IYB9 648 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 ZCCHC7Q8N3Z6 543 aaKnown RBP16.22■□□□□ 0.19
CLDN7-207ENST00000574070 PPP1R14CQ8TAE6 165 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 PGM2Q96G03 612 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 MRPL1Q9BYD6 325 aaKnown RBP16.22■□□□□ 0.19
CLDN7-207ENST00000574070 BRF2Q9HAW0 419 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 NECTIN3Q9NQS3 549 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 LYARQ9NX58 379 aaKnown RBP16.22■□□□□ 0.19
CLDN7-207ENST00000574070 PHF11Q9UIL8 331 aa16.22■□□□□ 0.19
CLDN7-207ENST00000574070 BOD1L1Q8NFC6 3051 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 UBFD1O14562 309 aaKnown RBP16.21■□□□□ 0.19
CLDN7-207ENST00000574070 EEDO75530 441 aaKnown RBP16.21■□□□□ 0.19
CLDN7-207ENST00000574070 GBAP04062 536 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 TLX1P31314 330 aaPredicted RBP16.21■□□□□ 0.19
CLDN7-207ENST00000574070 BSGP35613 385 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 BUD31P41223 144 aaPredicted RBP16.21■□□□□ 0.19
CLDN7-207ENST00000574070 HNRNPFP52597 415 aaKnown RBP16.21■□□□□ 0.19
CLDN7-207ENST00000574070 HSD17B7P56937 341 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 AP2B1P63010 937 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 STX4Q12846 297 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 VWA5B1Q5TIE3 1220 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 SCIMPQ6UWF3 145 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 GPR180Q86V85 440 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 TMEM52Q8NDY8 209 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 CNDP1Q96KN2 507 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 SSU72Q9NP77 194 aaKnown RBP16.21■□□□□ 0.19
CLDN7-207ENST00000574070 PNO1Q9NRX1 252 aaKnown RBP16.21■□□□□ 0.19
CLDN7-207ENST00000574070 MS4A12Q9NXJ0 267 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 KCMF1Q9P0J7 381 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 FIS1Q9Y3D6 152 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 PCDHGB7Q9Y5F8 929 aa16.21■□□□□ 0.19
CLDN7-207ENST00000574070 USP9XQ93008 2570 aaPredicted RBP16.2■□□□□ 0.18
CLDN7-207ENST00000574070 A0A1W2PQ72 361 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 WDR91A4D1P6 747 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 BLACEA4D250 179 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 CYR61O00622 381 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 PDGFAP04085 211 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 IFNA16P05015 189 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 SERPINA7P05543 415 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 KLK1P06870 262 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 CELA2AP08217 269 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 PRR35P0CG20 571 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 NEFHP12036 1026 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 HSD3B1P14060 373 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 HSD3B2P26439 372 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 HTR6P50406 440 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 FOXA1P55317 472 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 SOX8P57073 446 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 SRSF1Q07955 248 aaKnown RBP eCLIP16.2■□□□□ 0.18
CLDN7-207ENST00000574070 Q0VFX4 171 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 CSTF3Q12996 717 aaKnown RBP16.2■□□□□ 0.18
CLDN7-207ENST00000574070 IMPG1Q17R60 797 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 CCNYL2Q5T2Q4 361 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 AGAP7PQ5VUJ5 663 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 CUZD1Q86UP6 607 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 NUDCD3Q8IVD9 361 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 SCUBE1Q8IWY4 988 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 TEX19Q8NA77 164 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 AGAP4Q96P64 663 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 ZNF552Q9H707 407 aaPredicted RBP16.2■□□□□ 0.18
CLDN7-207ENST00000574070 DDX31Q9H8H2 851 aaKnown RBP16.2■□□□□ 0.18
CLDN7-207ENST00000574070 WDR41Q9HAD4 459 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 VPS29Q9UBQ0 182 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 ACTL7BQ9Y614 415 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 MED13Q9UHV7 2174 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 TEX15Q9BXT5 2789 aa16.2■□□□□ 0.18
CLDN7-207ENST00000574070 A0A0A6YYD5 115 aa16.19■□□□□ 0.18
CLDN7-207ENST00000574070 MYOCOSA0A1B0GUC4 107 aa16.19■□□□□ 0.18
CLDN7-207ENST00000574070 TCRBV16S1A1N1A0A5B0 115 aa16.19■□□□□ 0.18
CLDN7-207ENST00000574070 TM9SF1O15321 606 aa16.19■□□□□ 0.18
CLDN7-207ENST00000574070 TMPRSS11DO60235 418 aa16.19■□□□□ 0.18
CLDN7-207ENST00000574070 NPHS1O60500 1241 aa16.19■□□□□ 0.18
CLDN7-207ENST00000574070 DPM1O60762 260 aa16.19■□□□□ 0.18
CLDN7-207ENST00000574070 CTNSO60931 367 aa16.19■□□□□ 0.18
CLDN7-207ENST00000574070 LDB3O75112 727 aa16.19■□□□□ 0.18
CLDN7-207ENST00000574070 BPGMP07738 259 aa16.19■□□□□ 0.18
CLDN7-207ENST00000574070 FAM58BPP0C7Q3 252 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms