RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 SCUBE1Q8IWY4 988 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 BEST3Q8N1M1 668 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 PRR7Q8TB68 274 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 WDR20Q8TBZ3 569 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 ZNF483Q8TF39 744 aaPredicted RBP23.55■■□□□ 1.36
FANCA-228ENST00000567943 FAR1Q8WVX9 515 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 CENPKQ9BS16 269 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 SORBS1Q9BX66 1292 aaKnown RBP23.55■■□□□ 1.36
FANCA-228ENST00000567943 C1QTNF3Q9BXJ4 246 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 AGPAT4Q9NRZ5 378 aa23.55■■□□□ 1.36
FANCA-228ENST00000567943 ANKUB1A6NFN9 424 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 A8MUA0 341 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 CYR61O00622 381 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 DLX3O60479 287 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 TSPAN8P19075 237 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 PTX3P26022 381 aaPredicted RBP23.54■■□□□ 1.36
FANCA-228ENST00000567943 HSD17B7P56937 341 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 SLC13A2Q13183 592 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 ZNF324BQ6AW86 544 aaPredicted RBP23.54■■□□□ 1.36
FANCA-228ENST00000567943 OR4C11Q6IEV9 310 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 MILR1Q7Z6M3 343 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 ZNF595Q8IYB9 648 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 OR4F6Q8NGB9 312 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 RGMAQ96B86 450 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 MTFMTQ96DP5 389 aaKnown RBP23.54■■□□□ 1.36
FANCA-228ENST00000567943 MAPKAP1Q9BPZ7 522 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.54■■□□□ 1.36
FANCA-228ENST00000567943 LYRM4Q9HD34 91 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 KCMF1Q9P0J7 381 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 DCDC2Q9UHG0 476 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 TEKT2Q9UIF3 430 aa23.54■■□□□ 1.36
FANCA-228ENST00000567943 BLACEA4D250 179 aa23.53■■□□□ 1.36
FANCA-228ENST00000567943 PPP6CO00743 305 aa23.53■■□□□ 1.36
FANCA-228ENST00000567943 PLPP1O14494 284 aa23.53■■□□□ 1.36
FANCA-228ENST00000567943 SCELO95171 688 aa23.53■■□□□ 1.36
FANCA-228ENST00000567943 ATP5F1P24539 256 aaPredicted RBP23.53■■□□□ 1.36
FANCA-228ENST00000567943 HERVK_113P63132 956 aa23.53■■□□□ 1.36
FANCA-228ENST00000567943 TTC19Q6DKK2 380 aaPredicted RBP23.53■■□□□ 1.36
FANCA-228ENST00000567943 ST6GALNAC3Q8NDV1 305 aa23.53■■□□□ 1.36
FANCA-228ENST00000567943 OR2W6PQ8NHA6 318 aa23.53■■□□□ 1.36
FANCA-228ENST00000567943 ZNF354BQ96LW1 612 aa23.53■■□□□ 1.36
FANCA-228ENST00000567943 SLX1AQ9BQ83 275 aa23.53■■□□□ 1.36
FANCA-228ENST00000567943 ERVK-6Q9BXR3 956 aa23.53■■□□□ 1.36
FANCA-228ENST00000567943 FBXW2Q9UKT8 454 aa23.53■■□□□ 1.36
FANCA-228ENST00000567943 A0A1B0GTL3 188 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 SAGE2PA6NJ88 616 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 CDH16O75309 829 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 GLRA3O75311 464 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 SUPT7LO94864 414 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 AGFG2O95081 481 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 ETHE1O95571 254 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 OTCP00480 354 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 PPP2R1BP30154 601 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 TUBA3CQ13748 450 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 RASA2Q15283 850 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 UNC50Q53HI1 259 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 ZNF678Q5SXM1 525 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 FRG2Q64ET8 278 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 WDR93Q6P2C0 686 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 TUBA3EQ6PEY2 450 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 SH2D5Q6ZV89 423 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 CLNKQ7Z7G1 428 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 TRPC4APQ8TEL6 797 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 AENQ8WTP8 325 aaKnown RBP23.52■■□□□ 1.36
FANCA-228ENST00000567943 SIGLEC12Q96PQ1 595 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 TMEM237Q96Q45 408 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 FRG2BQ96QU4 278 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 EMCNQ9ULC0 261 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 SPACA6W5XKT8 324 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 DOPEY1Q5JWR5 2465 aa23.52■■□□□ 1.36
FANCA-228ENST00000567943 FOXE1O00358 373 aaPredicted RBP23.51■■□□□ 1.35
FANCA-228ENST00000567943 PRAMEF2O60811 474 aa23.51■■□□□ 1.35
FANCA-228ENST00000567943 CD96P40200 585 aa23.51■■□□□ 1.35
FANCA-228ENST00000567943 CLCQ05315 142 aa23.51■■□□□ 1.35
FANCA-228ENST00000567943 SRSF11Q05519 484 aaKnown RBP23.51■■□□□ 1.35
FANCA-228ENST00000567943 SLAMF1Q13291 335 aa23.51■■□□□ 1.35
FANCA-228ENST00000567943 CUL3Q13618 768 aa23.51■■□□□ 1.35
FANCA-228ENST00000567943 MEP1AQ16819 746 aa23.51■■□□□ 1.35
FANCA-228ENST00000567943 GGTA1PQ4G0N0 100 aa23.51■■□□□ 1.35
FANCA-228ENST00000567943 SLC22A9Q8IVM8 553 aa23.51■■□□□ 1.35
FANCA-228ENST00000567943 PNO1Q9NRX1 252 aaKnown RBP23.51■■□□□ 1.35
FANCA-228ENST00000567943 ANKRD10Q9NXR5 420 aa23.51■■□□□ 1.35
FANCA-228ENST00000567943 PSD3Q9NYI0 1048 aa23.51■■□□□ 1.35
FANCA-228ENST00000567943 ERRFI1Q9UJM3 462 aaPredicted RBP23.51■■□□□ 1.35
FANCA-228ENST00000567943 TLDC2A0PJX2 215 aa23.5■■□□□ 1.35
FANCA-228ENST00000567943 CTNSO60931 367 aa23.5■■□□□ 1.35
FANCA-228ENST00000567943 EDN3P14138 238 aa23.5■■□□□ 1.35
FANCA-228ENST00000567943 CPN2P22792 545 aa23.5■■□□□ 1.35
FANCA-228ENST00000567943 TDGF1P3P51864 188 aa23.5■■□□□ 1.35
FANCA-228ENST00000567943 PRKAA2P54646 552 aa23.5■■□□□ 1.35
FANCA-228ENST00000567943 IFT88Q13099 833 aa23.5■■□□□ 1.35
FANCA-228ENST00000567943 ERCC6LQ2NKX8 1250 aa23.5■■□□□ 1.35
FANCA-228ENST00000567943 SGO1Q5FBB7 561 aa23.5■■□□□ 1.35
FANCA-228ENST00000567943 ZNF468Q5VIY5 522 aaPredicted RBP23.5■■□□□ 1.35
FANCA-228ENST00000567943 LETMD1Q6P1Q0 360 aa23.5■■□□□ 1.35
FANCA-228ENST00000567943 EMBQ6PCB8 327 aa23.5■■□□□ 1.35
FANCA-228ENST00000567943 FAM180AQ6UWF9 173 aa23.5■■□□□ 1.35
FANCA-228ENST00000567943 APCDD1LQ8NCL9 501 aa23.5■■□□□ 1.35
FANCA-228ENST00000567943 MDS2Q8NDY4 140 aa23.5■■□□□ 1.35
FANCA-228ENST00000567943 CDCP1Q9H5V8 836 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms