RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 RABL2AQ9UBK7 228 aaPredicted RBP19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 CLEC4EQ9ULY5 219 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 PRELID1Q9Y255 219 aa19.58■□□□□ 0.73
MAP1LC3B-206ENST00000564844 FAM240BA0A1B0GVZ2 78 aa19.58■□□□□ 0.72
MAP1LC3B-206ENST00000564844 FADS2P1A8MWK0 482 aa19.58■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PTNP21246 168 aa19.58■□□□□ 0.72
MAP1LC3B-206ENST00000564844 STK19P49842 368 aaPredicted RBP19.58■□□□□ 0.72
MAP1LC3B-206ENST00000564844 IL18Q14116 193 aa19.58■□□□□ 0.72
MAP1LC3B-206ENST00000564844 TMC8Q8IU68 726 aa19.58■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PHC2Q8IXK0 858 aa19.58■□□□□ 0.72
MAP1LC3B-206ENST00000564844 WACQ9BTA9 647 aa19.58■□□□□ 0.72
MAP1LC3B-206ENST00000564844 HTATIP2Q9BUP3 242 aa19.58■□□□□ 0.72
MAP1LC3B-206ENST00000564844 OR51B5Q9H339 312 aa19.58■□□□□ 0.72
MAP1LC3B-206ENST00000564844 STMN3Q9NZ72 180 aa19.58■□□□□ 0.72
MAP1LC3B-206ENST00000564844 GPR52Q9Y2T5 361 aa19.58■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PRKAB1Q9Y478 270 aa19.58■□□□□ 0.72
MAP1LC3B-206ENST00000564844 C1SP09871 688 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 MSL3P1P0C860 447 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 EVI2BP34910 448 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 RAE1P78406 368 aaKnown RBP19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SLC35F1Q5T1Q4 408 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 GCNT6Q5T4J0 391 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 MLIPQ5VWP3 458 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PIP5K1AQ99755 562 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SLC23A1Q9UHI7 598 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 TMCC3Q9ULS5 477 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 TRAPPC4Q9Y296 219 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 HPGDSO60760 199 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SLC2A2P11168 524 aaPredicted RBP19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 AKR1A1P14550 325 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PTGER1P34995 402 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 LIM2P55344 173 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 RAB8AP61006 207 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 GPR19Q15760 415 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 KCNA10Q16322 511 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ADGRF1Q5T601 910 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 TRIQKQ629K1 86 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 OR52P1PQ8NH57 321 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SETD6Q8TBK2 473 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 UBTD2Q8WUN7 234 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 KLHL6Q8WZ60 621 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SLC22A12Q96S37 553 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 NELL2Q99435 816 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 NARFLQ9H6Q4 476 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 C5AR2Q9P296 337 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 STUB1Q9UNE7 303 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 JUPP14923 745 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PCGF2P35227 344 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 NSG1P42857 185 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 RPS25P62851 125 aaKnown RBP19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ZNF91Q05481 1191 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 MGAT3Q09327 533 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PLD1Q13393 1074 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 FLYWCH1Q4VC44 716 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ZNF57Q68EA5 555 aaPredicted RBP19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 CASP12Q6UXS9 341 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 MACC1Q6ZN28 852 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 CCDC149Q6ZUS6 474 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ASB18Q6ZVZ8 466 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 Q8N402 240 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 FAM46DQ8NEK8 389 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 TMEM80Q96HE8 168 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 CHST8Q9H2A9 424 aa19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 RUVBL1Q9Y265 456 aaKnown RBP19.57■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ZNF670-ZNF695F2Z2N8 137 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 FFAR1O14842 300 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 RPS3P23396 243 aaKnown RBP eCLIP19.56■□□□□ 0.728e-13■■■■■ 32.9
MAP1LC3B-206ENST00000564844 INPP1P49441 399 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 WSCD2Q2TBF2 565 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 BRAT1Q6PJG6 821 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 THOC6Q86W42 341 aaKnown RBP19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 FAM9CQ8IZT9 166 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 HUS1BQ8NHY5 278 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 C9orf43Q8TAL5 461 aaPredicted RBP19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 CREB3L4Q8TEY5 395 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 UROC1Q96N76 676 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SLC6A18Q96N87 628 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PLEKHB1Q9UF11 243 aaPredicted RBP19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 GSAPA4D1B5 854 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 E9PQ18 207 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 NOS1APO75052 506 aaPredicted RBP19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ELNP15502 786 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 CSTF2P33240 577 aaKnown RBP eCLIP19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 CD79BP40259 229 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ETV5P41161 510 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 BDKRB1P46663 353 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 AVPR1BP47901 424 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ETV1P50549 477 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 TARDBPQ13148 414 aaKnown RBP eCLIP19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 RNASE12Q5GAN4 147 aaKnown RBP19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 HECTD3Q5T447 861 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 LRRC70Q7Z2Q7 622 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 TMPRSS11BQ86T26 416 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 CCDC28AQ8IWP9 274 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PGBD3Q8N328 593 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ASB11Q8WXH4 323 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ZBED6CLQ96FA7 236 aaPredicted RBP19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 CDCP1Q9H5V8 836 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 RDH14Q9HBH5 336 aa19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 FTSJ1Q9UET6 329 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms