RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 PCBD2Q9H0N5 130 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 PRDM13Q9H4Q3 707 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 PRDM8Q9NQV8 689 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 SEMA4GQ9NTN9 838 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 IMP3Q9NV31 184 aaKnown RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 SPATA7Q9P0W8 599 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 TAAR2Q9P1P5 351 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 TBC1D29Q9UFV1 150 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 PILRBQ9UKJ0 227 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 PCDHGA9Q9Y5G4 932 aaKnown RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 PCDHGA8Q9Y5G5 932 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 PCDHGA7Q9Y5G6 932 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 PCDHGA6Q9Y5G7 932 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 PCDHGA3Q9Y5H0 932 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 CFAP20Q9Y6A4 193 aaKnown RBP4.44□□□□□ -1.7
CDR2-203ENST00000563573 CSNK1G3Q9Y6M4 447 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 USP34Q70CQ2 3546 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 VPS13AQ96RL7 3174 aa4.44□□□□□ -1.7
CDR2-203ENST00000563573 KMT2EQ8IZD2 1858 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 A0A1B0GVT2 93 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 TRPC5OSA6NMA1 111 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 OR52A4PA6NMU1 304 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 ARHGEF33A8MVX0 844 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 LMO7DNF2Z398 122 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 MYO1CO00159 1063 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 E2F3O00716 465 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 AZIN1O14977 448 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 SCAMP1O15126 338 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 YY2O15391 372 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 ITM2AO43736 263 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 RRP9O43818 475 aaKnown RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 SNNO75324 88 aaPredicted RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 PROP1O75360 226 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 SIX3O95343 332 aaPredicted RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 CLDN9O95484 217 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 SLC16A8O95907 504 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 FAM107AO95990 144 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 IGLV2-14P01704 120 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 FGF4P08620 206 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 RPS17P08708 135 aaKnown RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 EBLN1P0CF75 366 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 UROSP10746 265 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 MTHFD1P11586 935 aaKnown RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 OSMP13725 252 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 HGFP14210 728 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 GNAZP19086 355 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 CXCR2P25025 360 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 SHMT2P34897 504 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 PLA2G5P39877 138 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 BDKRB1P46663 353 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 RXRGP48443 463 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 AGTR2P50052 363 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 RAB28P51157 221 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 CDH13P55290 713 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 SIM1P81133 766 aaPredicted RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 IRF8Q02556 426 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 CDC16Q13042 620 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 LCP2Q13094 533 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 HNRNPA0Q13151 305 aaKnown RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 SRSF5Q13243 272 aaKnown RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 NAE1Q13564 534 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 CYP2A13Q16696 494 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 PHKG1Q16816 387 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 PTCHD3Q3KNS1 767 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 ARL13AQ5H913 290 aaPredicted RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 PAGE2BQ5JRK9 111 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 SH2D4BQ5SQS7 431 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 TPRG1LQ5T0D9 272 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 LIPJQ5W064 366 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 KLHL35Q6PF15 583 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 SPATA21Q7Z572 469 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 THOC6Q86W42 341 aaKnown RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 NRROSQ86YC3 692 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 LNX2Q8N448 690 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 TBC1D19Q8N5T2 526 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 SNX31Q8N9S9 440 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 NLGN4YQ8NFZ3 816 aaPredicted RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 OR6C4Q8NGE1 309 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 OR6Y1Q8NGX8 325 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 OR56A3Q8NH54 315 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 CCL4L1Q8NHW4 92 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 METTL6Q8TCB7 284 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 UBTD2Q8WUN7 234 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 SMPDL3AQ92484 453 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 ESAMQ96AP7 390 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 PTCD3Q96EY7 689 aaKnown RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 RMDN2Q96LZ7 410 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 RILPQ96NA2 401 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 ZNF317Q96PQ6 595 aaPredicted RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 TMEM237Q96Q45 408 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 CCT7Q99832 543 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 HAUS8Q9BT25 410 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 NTMT1Q9BV86 223 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 FAM107BQ9H098 131 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 ATG10Q9H0Y0 220 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 SRMSQ9H3Y6 488 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 KIR3DX1Q9H7L2 352 aa4.43□□□□□ -1.7
CDR2-203ENST00000563573 NOL11Q9H8H0 719 aaKnown RBP4.43□□□□□ -1.7
CDR2-203ENST00000563573 MID1IP1Q9NPA3 183 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms