RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 LRRC14BA6NHZ5 514 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 TMEM200CA6NKL6 621 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 ZNHIT1O43257 154 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 ASNA1O43681 348 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 ITGA10O75578 1167 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 ZFAND5O76080 213 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 KLHL2O95198 593 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 ALDOAP04075 364 aaKnown RBP9.58□□□□□ -0.88
CLK3-205ENST00000561673 HIST1H1TP22492 207 aaPredicted RBP9.58□□□□□ -0.88
CLK3-205ENST00000561673 PRSS12P56730 875 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 STX4Q12846 297 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 SETDB1Q15047 1291 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 ELAVL1Q15717 326 aaKnown RBP9.58□□□□□ -0.88
CLK3-205ENST00000561673 C3AR1Q16581 482 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 WHAMMP3Q1A5X7 153 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 AP5B1Q2VPB7 878 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 DEPDC1Q5TB30 811 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 SP5Q6BEB4 398 aaPredicted RBP9.58□□□□□ -0.88
CLK3-205ENST00000561673 OR4C11Q6IEV9 310 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 GRHL2Q6ISB3 625 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 C16orf47Q6ZP98 133 aaPredicted RBP9.58□□□□□ -0.88
CLK3-205ENST00000561673 CHSY3Q70JA7 882 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 SPPL2CQ8IUH8 684 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 RELL1Q8IUW5 271 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 SULF2Q8IWU5 870 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 TMEM132CQ8N3T6 1108 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 CPSF7Q8N684 471 aaKnown RBP9.58□□□□□ -0.88
CLK3-205ENST00000561673 FAM98AQ8NCA5 519 aaKnown RBP9.58□□□□□ -0.88
CLK3-205ENST00000561673 HUS1BQ8NHY5 278 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 ITLN2Q8WWU7 325 aaPredicted RBP9.58□□□□□ -0.88
CLK3-205ENST00000561673 TMEM125Q96AQ2 219 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 CMTM7Q96FZ5 175 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 POM121Q96HA1 1249 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 CCDC120Q96HB5 630 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 SORBS1Q9BX66 1292 aaKnown RBP9.58□□□□□ -0.88
CLK3-205ENST00000561673 ROGDIQ9GZN7 287 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 OR51B5Q9H339 312 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 LIN28AQ9H9Z2 209 aaKnown RBP9.58□□□□□ -0.88
CLK3-205ENST00000561673 PRM3Q9NNZ6 103 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 DMGDHQ9UI17 866 aaKnown RBP9.58□□□□□ -0.88
CLK3-205ENST00000561673 TINAGQ9UJW2 476 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 CLCA3PQ9Y6N3 262 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 ZGRF1Q86YA3 2104 aa9.58□□□□□ -0.88
CLK3-205ENST00000561673 ADGRG4Q8IZF6 3080 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 CCDC189A1A4V9 331 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 SYNDIG1LA6NDD5 238 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 KLK8O60259 260 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 LDB3O75112 727 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 OR2J2O76002 312 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 SCELO95171 688 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 ACSL3O95573 720 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 MLYCDO95822 493 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 GFAPP14136 432 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 TYK2P29597 1187 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 SERPINB1P30740 379 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 PHBP35232 272 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 PIK3CBP42338 1070 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 SERPINB8P50452 374 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 ALDH18A1P54886 795 aaKnown RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 CASP6P55212 293 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 HSF1Q00613 529 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 ID2Q02363 134 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 SLAMF1Q13291 335 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 DDX39BQ13838 428 aaKnown RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 NAA30Q147X3 362 aaPredicted RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 KHDRBS2Q5VWX1 349 aaKnown RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 LIPJQ5W064 366 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 Q6ZPB1 254 aaPredicted RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 MDGA2Q7Z553 956 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 MYLK4Q86YV6 388 aaPredicted RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 CHERPQ8IWX8 916 aaKnown RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 SLC34A3Q8N130 599 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 CYP4Z2PQ8N1L4 340 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 PLD6Q8N2A8 252 aaKnown RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 MMGT1Q8N4V1 131 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 TMEM156Q8N614 296 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 ZNF321PQ8N8H1 164 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 NOA1Q8NC60 698 aaKnown RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 MORN4Q8NDC4 146 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 SLC44A1Q8WWI5 657 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 SREK1Q8WXA9 508 aaKnown RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 IFT81Q8WYA0 676 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 ZNF592Q92610 1267 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 DAZLQ92904 295 aaKnown RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 ANKRD9Q96BM1 317 aaPredicted RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 MAGED4Q96JG8 741 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 MTERF1Q99551 399 aaKnown RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 CCDC77Q9BR77 488 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 FUT8Q9BYC5 575 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 ACSS3Q9H6R3 686 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 ZNF358Q9NW07 568 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 MYOTQ9UBF9 498 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 SUCOQ9UBS9 1254 aaKnown RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 MTRF1LQ9UGC7 380 aaKnown RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 ADGRE2Q9UHX3 823 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 KLF13Q9Y2Y9 288 aaPredicted RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 YARS2Q9Y2Z4 477 aaKnown RBP9.57□□□□□ -0.88
CLK3-205ENST00000561673 ANGPTL3Q9Y5C1 460 aa9.57□□□□□ -0.88
CLK3-205ENST00000561673 DCHS2Q6V1P9 2916 aa9.56□□□□□ -0.88
CLK3-205ENST00000561673 C17orf105B2RV13 164 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms