RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 COX6A1P12074 109 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 RNH1P13489 461 aaKnown RBP10.24□□□□□ -0.77
TPM1-217ENST00000559108 TIA1P31483 386 aaKnown RBP eCLIP10.24□□□□□ -0.77
TPM1-217ENST00000559108 PTGER1P34995 402 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 SOX18P35713 384 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 RPL14P50914 215 aaKnown RBP10.24□□□□□ -0.77
TPM1-217ENST00000559108 ARFIP1P53367 373 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 RPS15P62841 145 aaKnown RBP10.24□□□□□ -0.77
TPM1-217ENST00000559108 CXADRP78310 365 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 PHEXP78562 749 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 MC1RQ01726 317 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 GUCY1A3Q02108 690 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 TNFRSF17Q02223 184 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 EEF1A2Q05639 463 aaKnown RBP10.24□□□□□ -0.77
TPM1-217ENST00000559108 ZNF33BQ06732 778 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 VAC14Q08AM6 782 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 Q0VFX4 171 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 PCOLCEQ15113 449 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 ZNF750Q32MQ0 723 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 MINDY4Q4G0A6 757 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 FAM180BQ6P0A1 224 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 GALNT18Q6P9A2 607 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 PCSK4Q6UW60 755 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 TMEM205Q6UW68 189 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 DGAT2L6Q6ZPD8 337 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 FAM47EQ6ZV65 393 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 WDR75Q8IWA0 830 aaKnown RBP10.24□□□□□ -0.77
TPM1-217ENST00000559108 OR4N5Q8IXE1 308 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 DDIASQ8IXT1 998 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 GBP7Q8N8V2 638 aaPredicted RBP10.24□□□□□ -0.77
TPM1-217ENST00000559108 OR11G2Q8NGC1 345 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 RAB3IL1Q8TBN0 382 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 DOK4Q8TEW6 326 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 ANKRD9Q96BM1 317 aaPredicted RBP10.24□□□□□ -0.77
TPM1-217ENST00000559108 C19orf60Q96EN9 201 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 EGLN2Q96KS0 407 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 OR1F2PQ96R84 312 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 TRIM55Q9BYV6 548 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 NUF2Q9BZD4 464 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 ACBD3Q9H3P7 528 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 COPS7BQ9H9Q2 264 aaPredicted RBP10.24□□□□□ -0.77
TPM1-217ENST00000559108 EML4Q9HC35 981 aaKnown RBP10.24□□□□□ -0.77
TPM1-217ENST00000559108 LYRM4Q9HD34 91 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 MED4Q9NPJ6 270 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 THAP1Q9NVV9 213 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 SIRT5Q9NXA8 310 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 KCND3Q9UK17 655 aa10.24□□□□□ -0.77
TPM1-217ENST00000559108 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.24□□□□□ -0.77
TPM1-217ENST00000559108 A0A1W2PQ72 361 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 ZNF891A8MT65 544 aaPredicted RBP10.23□□□□□ -0.77
TPM1-217ENST00000559108 PCDH7O60245 1069 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 KITP10721 976 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 PIM1P11309 404 aaPredicted RBP10.23□□□□□ -0.77
TPM1-217ENST00000559108 SDC1P18827 310 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 CPN2P22792 545 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 MMP11P24347 488 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 TSFMP43897 325 aaKnown RBP10.23□□□□□ -0.77
TPM1-217ENST00000559108 GYS2P54840 703 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 EMP2P54851 167 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 TMPRSS3P57727 454 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 RPL38P63173 70 aaKnown RBP10.23□□□□□ -0.77
TPM1-217ENST00000559108 OCA2Q04671 838 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 NR6A1Q15406 480 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 TUBB8Q3ZCM7 444 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 GALNTL6Q49A17 601 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 SPDYAQ5MJ70 313 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 C6orf136Q5SQH8 315 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 CCNYL2Q5T2Q4 361 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 CGB2Q6NT52 195 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 NOXRED1Q6NXP6 359 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 LRRC69Q6ZNQ3 347 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 RGS9BPQ6ZS82 235 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 ANKRD37Q7Z713 158 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 GPR180Q86V85 440 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 EFCAB3Q8N7B9 438 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 SRFBP1Q8NEF9 429 aaKnown RBP10.23□□□□□ -0.77
TPM1-217ENST00000559108 CLHC1Q8NHS4 586 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 C16orf78Q8WTQ4 265 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 MAGEB18Q96M61 343 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 C1orf50Q9BV19 199 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 ILKAPQ9H0C8 392 aaPredicted RBP10.23□□□□□ -0.77
TPM1-217ENST00000559108 WDR55Q9H6Y2 383 aaPredicted RBP10.23□□□□□ -0.77
TPM1-217ENST00000559108 LRTM1Q9HBL6 345 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 PRM3Q9NNZ6 103 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 C14orf105Q9NVL8 296 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 FAM53CQ9NYF3 392 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 MCM8Q9UJA3 840 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 ADAM29Q9UKF5 820 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 CES1P1Q9UKY3 287 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 PADI2Q9Y2J8 665 aa10.23□□□□□ -0.77
TPM1-217ENST00000559108 LOC102723996A0A087X1L8 192 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 TCRBV16S1A1N1A0A5B0 115 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 ARGFXA6NJG6 315 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 TCP11X1B4DZS4 312 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 PEX11AO75192 247 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 HEXBP07686 556 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 IL3P08700 152 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 ALDOCP09972 364 aaKnown RBP10.22□□□□□ -0.77
TPM1-217ENST00000559108 CD1EP15812 388 aa10.22□□□□□ -0.77
TPM1-217ENST00000559108 MAPK12P53778 367 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms