RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 ABRAXAS2Q15018 415 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 SETDB1Q15047 1291 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 PCBP2Q15366 365 aaKnown RBP eCLIP14.28□□□□□ -0.12
RPL28-206ENST00000558752 MAPKAPK3Q16644 382 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 PFKFB4Q16877 469 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 TMEM35AQ53FP2 167 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 TOR1AIP1Q5JTV8 583 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 LIPJQ5W064 366 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 MED27Q6P2C8 311 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 TRIM40Q6P9F5 258 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 TIFABQ6ZNK6 161 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 QSOX2Q6ZRP7 698 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 CHSY3Q70JA7 882 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.28□□□□□ -0.12
RPL28-206ENST00000558752 CDH24Q86UP0 819 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 LCA5Q86VQ0 697 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 LAS2Q8IYD9 372 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 CCDC168Q8NDH2 2452 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 OR2L5Q8NG80 312 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.28□□□□□ -0.12
RPL28-206ENST00000558752 EXT2Q93063 718 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 ESAMQ96AP7 390 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 CCDC77Q9BR77 488 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 MCCC2Q9HCC0 563 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 PSD3Q9NYI0 1048 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 TSC22D4Q9Y3Q8 395 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 MMACHCQ9Y4U1 282 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 ANGPTL3Q9Y5C1 460 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 PCDHGA11Q9Y5H2 935 aa14.28□□□□□ -0.12
RPL28-206ENST00000558752 EXOC1LA0A1B0GW35 172 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 FOXO6A8MYZ6 492 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 CLDN4O14493 209 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 B3GALT2O43825 422 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 PRAMEF4O60810 478 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 SLC25A12O75746 678 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 EPORP19235 508 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 ARFIP1P53367 373 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 IRF9Q00978 393 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 TLE4Q04727 773 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 PRAMEF9Q5VWM5 478 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 TMEM211Q6ICI0 200 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 ABHD17CQ6PCB6 329 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 ADGRD1Q6QNK2 874 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 SPNS3Q6ZMD2 512 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 OR5T3Q8NGG3 340 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 AGAP11Q8TF27 550 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 DCAKDQ8WVC6 231 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 ASB5Q8WWX0 329 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 CCT6BQ92526 530 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 REPS1Q96D71 796 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 PTCHD1Q96NR3 888 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 KCNC2Q96PR1 638 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 SERINC2Q96SA4 455 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 TBCDQ9BTW9 1192 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 ENKD1Q9H0I2 346 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 TSPAN10Q9H1Z9 355 aaPredicted RBP14.27□□□□□ -0.13
RPL28-206ENST00000558752 CDCP1Q9H5V8 836 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 L2HGDHQ9H9P8 463 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 PRDM9Q9NQV7 894 aa14.27□□□□□ -0.13
RPL28-206ENST00000558752 MRPS33Q9Y291 106 aaKnown RBP14.27□□□□□ -0.13
RPL28-206ENST00000558752 ZNF860A6NHJ4 632 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 KLRC4-KLRK1H3BQV0 150 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 FCHO1O14526 889 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 RIPK2O43353 540 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 ERI3O43414 337 aaKnown RBP14.26□□□□□ -0.13
RPL28-206ENST00000558752 SMIM24O75264 130 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 RHOXF2BP0C7M4 288 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 PIK3CBP42338 1070 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 EFNA3P52797 238 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 MTTPP55157 894 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 SLC26A5P58743 744 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 FBXO48Q5FWF7 155 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 GRHL2Q6ISB3 625 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 MEX3BQ6ZN04 569 aaKnown RBP14.26□□□□□ -0.13
RPL28-206ENST00000558752 SIAH3Q8IW03 269 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 CA13Q8N1Q1 262 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 TEX9Q8N6V9 391 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 SDCCAG3Q96C92 435 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 CMTM7Q96FZ5 175 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 MRPL57Q9BQC6 102 aaKnown RBP14.26□□□□□ -0.13
RPL28-206ENST00000558752 RHOXF2Q9BQY4 288 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 CENPKQ9BS16 269 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 PPT2Q9UMR5 302 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 KLF13Q9Y2Y9 288 aaPredicted RBP14.26□□□□□ -0.13
RPL28-206ENST00000558752 CACNA1CQ13936 2221 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 GTF3C1Q12789 2109 aa14.26□□□□□ -0.13
RPL28-206ENST00000558752 IQANK1A0A1B0GTG1 560 aa14.25□□□□□ -0.13
RPL28-206ENST00000558752 TRIM49D1C9J1S8 452 aa14.25□□□□□ -0.13
RPL28-206ENST00000558752 STX16-NPEPL1H3BU86 382 aa14.25□□□□□ -0.13
RPL28-206ENST00000558752 C19orf84I3L1E1 186 aa14.25□□□□□ -0.13
RPL28-206ENST00000558752 STX16O14662 325 aa14.25□□□□□ -0.13
RPL28-206ENST00000558752 NME2P1O60361 137 aa14.25□□□□□ -0.13
RPL28-206ENST00000558752 B4GALT2O60909 372 aa14.25□□□□□ -0.13
RPL28-206ENST00000558752 CDC123O75794 336 aaPredicted RBP14.25□□□□□ -0.13
RPL28-206ENST00000558752 NEURL1O76050 574 aa14.25□□□□□ -0.13
RPL28-206ENST00000558752 CD22P20273 847 aa14.25□□□□□ -0.13
RPL28-206ENST00000558752 NME2P22392 152 aa14.25□□□□□ -0.13
RPL28-206ENST00000558752 PTX3P26022 381 aaPredicted RBP14.25□□□□□ -0.13
RPL28-206ENST00000558752 HNRNPH1P31943 449 aaKnown RBP14.25□□□□□ -0.13
RPL28-206ENST00000558752 GMPRP36959 345 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms