RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 LHX6Q9UPM6 363 aa24.03■■□□□ 1.44
SMAD6-202ENST00000557916 ASB4Q9Y574 426 aa24.03■■□□□ 1.44
SMAD6-202ENST00000557916 HNRNPH2P55795 449 aaKnown RBP24.02■■□□□ 1.44
SMAD6-202ENST00000557916 RHDQ02161 417 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 SPIN4Q56A73 249 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 RNF165Q6ZSG1 346 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 LANCL3Q6ZV70 420 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 TMEM102Q8N9M5 508 aaPredicted RBP24.02■■□□□ 1.44
SMAD6-202ENST00000557916 RAB3IL1Q8TBN0 382 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 TWIST2Q8WVJ9 160 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 TSLPQ969D9 159 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 APIPQ96GX9 242 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 ILKAPQ9H0C8 392 aaPredicted RBP24.02■■□□□ 1.44
SMAD6-202ENST00000557916 TUBB1Q9H4B7 451 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 PRTFDC1Q9NRG1 225 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 C19orf25Q9UFG5 118 aaPredicted RBP24.02■■□□□ 1.44
SMAD6-202ENST00000557916 FBXL4Q9UKA2 621 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.02■■□□□ 1.44
SMAD6-202ENST00000557916 RAP2CQ9Y3L5 183 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 ATG4BQ9Y4P1 393 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 MMACHCQ9Y4U1 282 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 PTGDR2Q9Y5Y4 395 aa24.02■■□□□ 1.44
SMAD6-202ENST00000557916 SLC28A1O00337 649 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 PROM1O43490 865 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 LINC00032P0C843 101 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 MAOAP21397 527 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 RRADP55042 308 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 HSD17B7P56937 341 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 EEF1A2Q05639 463 aaKnown RBP24.01■■□□□ 1.43
SMAD6-202ENST00000557916 ACSM2AQ08AH3 577 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 SLC13A2Q13183 592 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 ATG16L1Q676U5 607 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 ACSM2BQ68CK6 577 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 ANKRD37Q7Z713 158 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 DDIASQ8IXT1 998 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 ZNF781Q8N8C0 355 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 FER1L6-AS2Q96M78 137 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 SORT1Q99523 831 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 MANSC1Q9H8J5 431 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 NUP210LQ5VU65 1888 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 PCSK5Q92824 1860 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 LOC102723996A0A087X1L8 192 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 BLACEA4D250 179 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 ATP8B1O43520 1251 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 RGS14O43566 566 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 RSL1D1O76021 490 aaKnown RBP24.01■■□□□ 1.43
SMAD6-202ENST00000557916 TLX1P31314 330 aaPredicted RBP24.01■■□□□ 1.43
SMAD6-202ENST00000557916 BUD31P41223 144 aaPredicted RBP24.01■■□□□ 1.43
SMAD6-202ENST00000557916 MAPK12P53778 367 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 CHAF1BQ13112 559 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 DCAF10Q5QP82 559 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 CPZQ66K79 652 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 APLFQ8IW19 511 aaPredicted RBP24.01■■□□□ 1.43
SMAD6-202ENST00000557916 ING2Q9H160 280 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 NECTIN3Q9NQS3 549 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 CCL27Q9Y4X3 112 aa24.01■■□□□ 1.43
SMAD6-202ENST00000557916 A0A1W2PQ72 361 aa24■■□□□ 1.43
SMAD6-202ENST00000557916 A0A1W2PR48 441 aa24■■□□□ 1.43
SMAD6-202ENST00000557916 PIP5K1BO14986 540 aa24■■□□□ 1.43
SMAD6-202ENST00000557916 CTNSO60931 367 aa24■■□□□ 1.43
SMAD6-202ENST00000557916 TNFRSF17Q02223 184 aa24■■□□□ 1.43
SMAD6-202ENST00000557916 C18orf63Q68DL7 685 aa24■■□□□ 1.43
SMAD6-202ENST00000557916 Q6ZSR9 355 aa24■■□□□ 1.43
SMAD6-202ENST00000557916 CPEB2Q7Z5Q1 589 aaKnown RBP24■■□□□ 1.43
SMAD6-202ENST00000557916 SCUBE1Q8IWY4 988 aa24■■□□□ 1.43
SMAD6-202ENST00000557916 RPF2Q9H7B2 306 aaKnown RBP24■■□□□ 1.43
SMAD6-202ENST00000557916 THAP1Q9NVV9 213 aa24■■□□□ 1.43
SMAD6-202ENST00000557916 MCM8Q9UJA3 840 aa24■■□□□ 1.43
SMAD6-202ENST00000557916 NBEAQ8NFP9 2946 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 SCN2AQ99250 2005 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 IGKV3D-11A0A0A0MRZ8 115 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 IGHV1-45A0A0A0MS14 117 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 MASP2O00187 686 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 COX6A1P12074 109 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 RPL14P50914 215 aaKnown RBP23.99■■□□□ 1.43
SMAD6-202ENST00000557916 RAE1P78406 368 aaKnown RBP23.99■■□□□ 1.43
SMAD6-202ENST00000557916 HSP90B2PQ58FF3 399 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 NDUFAF7Q7L592 441 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 CLNKQ7Z7G1 428 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 KIRREL3Q8IZU9 778 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 TTC9Q92623 222 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 ZNF700Q9H0M5 742 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 WDR41Q9HAD4 459 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 SIRT5Q9NXA8 310 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 HAO1Q9UJM8 370 aa23.99■■□□□ 1.43
SMAD6-202ENST00000557916 NSG1A0A0A6YYJ2 146 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 IGHV3-20A0A0C4DH32 117 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 TCRBV16S1A1N1A0A5B0 115 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 PCDH7O60245 1069 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 SNNO75324 88 aaPredicted RBP23.98■■□□□ 1.43
SMAD6-202ENST00000557916 GUCY1B2O75343 617 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 SKAP2O75563 359 aaPredicted RBP23.98■■□□□ 1.43
SMAD6-202ENST00000557916 AIFM1O95831 613 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 HPP00738 406 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 NR2F6P10588 404 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 NR1D1P20393 614 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 PRPH2P23942 346 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 OR4D2P58180 307 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 PCOLCEQ15113 449 aa23.98■■□□□ 1.43
SMAD6-202ENST00000557916 NR6A1Q15406 480 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms